Lichenihabitans sp. PAMC28606: LGH83_04515
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Entry
LGH83_04515 CDS
T07621
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
liz03021
]
LGH83_04515
Transcription machinery [BR:
liz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LGH83_04515
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
UDL95490
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Position
961215..962069
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AA seq
284 aa
AA seq
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MASLSDVSRLIMCTARAAPTLTVIEEKALLARHQQYADAAALNDLAASNLRRVISVANSM
RGYGLPLDDLVQEGCCGMVMAAQRYDLDRDVPFGAYARIWMKAEMQDFILRNWSIVRLAM
GSDEQKMFFKMRQLRAKLSRDPDKTSAAVTGEIAMAFGVTIDDVEILRARMGQGDFSLNA
PAFQDEDGGSEWGDFLADDAPQFDDMLDDQQCAGDLRTAMSGLDDQERLIIEERWLNDEI
APLNALSEWFGISVTKVRRIEVAAIKKLRAAMLAMRAAPNPVFA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgctttcggatgtcagccggctcattatgtgcaccgcccgcgctgcaccgacc
ctaaccgtcatcgaagagaaggcgctgctcgcccggcatcagcaatatgccgacgcggcc
gctctcaacgatctggcggcgtccaacctgcgccgggtaatctccgtcgccaacagcatg
cgaggctatggcctgcccctcgacgacctcgtccaggaaggctgctgcggcatggtgatg
gcggcccagcggtacgatcttgatcgcgatgtgccgttcggagcttatgcgcggatctgg
atgaaggctgaaatgcaggacttcatcctgcgtaactggtcgatcgtccggctggctatg
ggctccgacgagcagaagatgtttttcaagatgcggcagctgcgggcgaaattaagccgc
gatccggacaagacgagtgctgccgtaacgggtgagattgcgatggcgttcggcgtgacg
atcgatgacgtcgagatcctccgagcacggatgggccagggcgacttctcgctgaacgcg
ccggcttttcaggatgaagacggcggctccgaatggggtgactttcttgccgacgacgcg
ccgcagttcgacgacatgctggacgatcagcagtgtgccggtgatctgcggacggcgatg
tccggtctcgatgaccaggagcgcctgatcatcgaggaacgctggctgaacgacgagatc
gcgccgctgaacgcgctgagcgaatggttcggcatctcggtcacgaaggtaaggcggatc
gaggtcgcagcgatcaagaagctccgcgcggcgatgttggccatgcgggcggcgcccaac
ccggttttcgcctga
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