KEGG   Lichenihabitans sp. PAMC28606: LGH83_05745
Entry
LGH83_05745       CDS       T07621                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
liz  Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:liz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:liz03021]
    LGH83_05745 (rpoH)
Transcription machinery [BR:liz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LGH83_05745 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11 HTH_19 Sigma70_r3 HTH_25 Sigma70_r4_2 HTH_7 GntR
Other DBs
NCBI-ProteinID: UDL95713
LinkDB
Position
complement(1194102..1195007)
AA seq 301 aa
MAPALPMISSESGLSRYLNEIRRFPMLQPQQEFMLAKRWREHDDRDAAHELVTSHLRLVA
KIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPDKGFRLATYAIWWIRASIQEYILRSWS
LVKMGTTANQKKLFFNLRKAKSQISALEEGDLHPDHVQTIATKLGVTAQDVIDMNRRLGG
DSSLNSPMREDGDGEWQDWLVDDSTNQEVLLADHEESSNRHDALKGALDVLNPRERRIFE
ARRLAEDPITLEQLSEEFNISRERVRQIEVRAFEKVQAAVKTGLARIEASRPLLESQSSV
H
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcgcctgctctcccgatgatctcaagcgaaagcggtctttcccgctatctcaatgag
attcgtcgctttcccatgcttcagccccagcaggaattcatgctggcgaagcgttggcgt
gagcacgacgatcgcgacgcggcccacgaactcgtgacctcgcatcttcgcctcgttgcc
aagatcgcgatgggctatcgcggctacggactcccgatcggcgaagtcatttcggaaggc
aatgtcggcttgatgcaggctgtgaagcggttcgagcccgacaagggcttccgccttgcg
acttatgcgatctggtggattcgcgcgtcgatccaggaatatattcttcgttcctggtca
ctcgtgaagatggggacgactgccaatcagaagaagctgttcttcaacctgcggaaggcg
aagagccagatctcggcgttggaggaaggcgatcttcatcccgaccacgttcagaccatc
gcgaccaagctcggggtgaccgcgcaggacgtgatcgacatgaaccgccgccttggtggc
gacagctccctgaattcaccgatgcgcgaggacggcgacggcgagtggcaggactggctc
gttgacgattcgacgaaccaagaggttctgcttgccgaccacgaagaaagctctaatcgc
cacgacgcgctgaagggagcgctcgatgttttgaatccgcgtgagcgccgcatcttcgag
gcgcgtcgtcttgcggaggatccgattacgctcgagcaactctccgaagagttcaacatc
tcgcgtgagcgcgttcggcaaatcgaggtgagagccttcgaaaaggtgcaggctgccgtg
aagaccggattggcgcggatcgaagcaagccggcctttgttggagtcgcaatcgagcgtt
cattga

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