Lichenihabitans sp. PAMC28606: LGH83_07550
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Entry
LGH83_07550 CDS
T07621
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liz03400
]
LGH83_07550 (addA)
Enzymes [BR:
liz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGH83_07550 (addA)
DNA repair and recombination proteins [BR:
liz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LGH83_07550 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UDL96040
LinkDB
All DBs
Position
1593082..1596564
Genome browser
AA seq
1160 aa
AA seq
DB search
MSQNIPVDTIVNQQRASDPTGSAWVSANAGSGKTFVLTRRVIRLLLGGVAPSRILCLTFT
KAAAANMSIRVFDTLARWVTMDDAALSAAMIETGAPRPTPADLAAARRLFARTVETPGGL
KILTIHAFCEKMLHAFPFEANVAARFTVIEATQQAELLSRAREAALAEAVDDPDSPLGQA
VERLGRTLSTAVFDGLVAEVSTHYGSLRASLQAAGGIDRLGDALGQALGTGGLGIADVER
AMLDDGLQRSEWESIGQHLASLGSATGERLIEAARATGPGVIAAYLDVFLTQKLGKRADS
YLAKKVRAAEASLCATLDAERDRLVDLLAKRRAAEAFEGTMALLTVAGAILDTYEGLKRR
RGLLDFSDLIERSRMLLQRSDSAWVLYKLDSGIDHVLVDEAQDTSPDQWDILRAISRDFF
SGEGQSRSNRTFFAVGDAKQSIYSFQGARPAMFDAAHQDYKKRAIAAGLRFESVRLQLSF
RSARTVLDVVDRIFAHEGHARGLSAGADGVMPHEALKRAIPGLVELWRPIGPTPAPEPAD
WRLPVDLPDASDPAVVMARRVADTIARLTAPGSTETVHDGPSDRRRSVHPGDILILVRSR
GPFFNAVIRALKDKRVPVAGADRVNLTDHIAVMDLTAAGRAALLPDDDLTLACALKSPLM
GFDDDDLLRLAPQRGGSLAEAIAASTNDRDRTAANWLSIWRDRAATLTPFAFYTRLLGQD
GGRRKLLSRLGPEAGDVIDEFMALTLAHERDGAPSLLTFLARLEGTELSVKRDMDAAGDA
VRVMTVHAAKGLEAKIVFLPDTCGVPRKQHDPKLFWLDGERLDGEQSSESRPGLLVWSPK
SDADTPAVADRRLAGWEATLDEHRRLLYVALTRAEERLYIGGFHGKNDPAADSWYKMIEA
VDLGLEPVPAPWDANDTILRRSDPMGEATMAVAAPAGLPVEAPAWLNCPAPREVAVAPPI
RPSNALGAADQPPRDASDLAIGPRPTAQREAALVGRLMHRLLQHLPAVATPRRRDAGLRY
LAAQGRALTAEKRDQLVTTALRVLDEPALLPLFGPGSQAEVAIAARVDVAGHEVDVTGQI
DRIALTDDAIWIGDYKTGAAPRGGTVPSSYMVQLALYRSAVSPLYPGRVVRAFLIWTEGP
LVMELASGDLDAALSTLGPR
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacattccggtcgatacgatcgtcaaccagcagcgcgcgtcggatccgacc
gggtcggcctgggtgtcggccaatgccgggtcgggcaaaaccttcgtactgacccgtcgc
gtgatccgactgttgctcggcggggtcgcaccgagccgcatcctctgcctcaccttcacc
aaggcggcagccgccaatatgtcgattcgggtcttcgacaccctggcccgctgggtcacg
atggacgatgcggcgctgtcggccgccatgatcgaaacgggcgcgccgcgtcccaccccg
gcggatcttgcggcggcgcgacgtctattcgcccgaacggtcgagacaccgggcggcttg
aagatcctgacgatccacgccttctgcgagaagatgctgcacgccttcccgttcgaggcc
aatgtggcggcccgcttcaccgtcatcgaggcaacacagcaagccgaattgctgtcccgc
gcgcgcgaagccgctttggccgaggccgtcgacgaccccgactcccccctcgggcaggct
gtcgagcggctcgggcgaactctgtcgaccgccgttttcgacgggctcgtggcggaggtg
tcgacgcattatggttcgttgcgagccagtctacaggcggccggcggcatcgatcgcctg
ggtgacgcgctgggacaggcgctcggcacgggcgggctcgggatcgccgacgtcgaacgc
gccatgctggacgatggcctacagcgctccgaatgggagagcatcggccagcatctcgcc
agcctcggcagcgcgactggcgagcggctgatcgaggcggcgcgggccaccggccccggc
gttatcgcggcctatctcgacgtcttcctcacgcagaagctcggcaaacgggctgatagc
tatctggccaagaaagtgcgggcggccgaggcgtctctctgcgcgactttggatgccgag
cgcgatcggctcgtggacctgttggcgaaacggcgggccgccgaggcgttcgagggcacg
atggcactgctgacggtggcgggcgccatccttgacacctacgagggcctgaagcgccgt
cgcggcttgttggatttttccgatctgatcgaacgcagccgcatgttgctgcagcgctcc
gacagcgcctgggtgctctacaagctcgattcgggcatcgaccatgtcttggtcgacgag
gcgcaggatacatcccccgaccaatgggacatcctgcgcgccatcagccgggacttcttc
tccggcgaggggcaaagccgaagcaaccgcaccttctttgcggtcggtgacgcgaagcaa
tcgatctattcgttccagggcgcccgccccgccatgttcgatgccgctcaccaggattat
aaaaagcgcgcgatcgcggcgggccttcggttcgaaagcgtgcggcttcagctgtcgttc
cgctcggcccgcacggtattggatgtcgtcgaccgcatctttgcccatgaggggcacgcg
cgcgggctctcggctggagccgatggcgtgatgccgcatgaagctttgaagcgcgccatt
ccgggcctcgtggaactgtggaggccgatcgggccgacaccggcgcccgaacccgccgat
tggcggttgccggtcgatctgcccgacgcgtccgatcctgccgtcgtgatggcacgtcgc
gtcgccgacacgatcgcgcggctgacggcacccggctcgacagaaaccgttcacgacggc
ccctccgaccgtcgccggtccgtgcaccccggtgacatcctaattctcgtgcgctcgcgc
ggcccgttcttcaatgcggtgatccgggccctgaaggacaaacgcgtgcccgtcgcgggg
gcggatcgcgtcaatctgacggatcatatcgccgtcatggatctcacggcggcggggcgc
gcggccttgctgcccgacgacgacctgacgctcgcttgcgcgctgaaatcgccactgatg
gggttcgacgacgacgacctgctgaggctcgccccacagcgaggcggtagccttgccgag
gcgatcgcagcatccacgaacgaccgggaccggacggctgccaactggctttcgatttgg
cgcgacagggccgcgacactgacgcccttcgcgttctacacgcggctgctcggtcaggac
ggcggccgtcgcaagctcctgtcgcgcctcggccccgaagccggcgacgtgatcgacgag
tttatggccctgacgctggcgcatgagcgcgatggcgcgccctcgctattgaccttcttg
gcccggctggaaggcaccgagctttcggtcaaacgcgacatggacgcggccggcgacgca
gttcgggtcatgacggtccatgcggccaaaggtctcgaagccaagatcgtgttcctgccc
gacacgtgtggcgtaccgaggaaacagcacgatccgaagttgttctggctcgacggcgag
cggctcgacggcgagcaatcgagcgaatctcgtccgggtctactggtctggtcacccaaa
agcgatgccgacacgccagcggtggccgaccggcgcttggccggctgggaggcgacgctc
gatgaacatcggcgtctcctttatgtggcgctgacgcgagccgaggagcgcctctatatc
ggcgggttccatggcaaaaacgaccccgccgccgatagctggtacaagatgatcgaggcg
gtcgatctcggcctcgagccggtaccggctccatgggatgccaatgacacgatcctcagg
cgcagcgatccgatgggcgaggccacgatggcggtcgcggcaccagcgggtttacctgtg
gaagccccggcgtggctgaattgccccgctccgcgcgaggttgcggtcgcgccgccgatc
cgcccgtccaacgcgcttggggcagccgaccaacctccccgcgacgcgagtgatctcgcg
atcgggcctcgcccgaccgctcagcgcgaggcggccctcgtcgggcgcctcatgcaccgg
ctgctgcagcatctccccgccgtcgccacccctcgccgccgcgatgccggcttgcgctat
ctcgcggcgcagggccgcgcgctcacggcggagaagcgcgaccagctcgtcacgacggcg
ttgcgcgtgctcgacgaaccggcactgttgccgctgttcgggccgggctcgcaggccgag
gtggcgatcgcggcccgggtcgacgtcgccggacatgaggtcgatgtcaccgggcagatc
gatcggatcgcgttgaccgacgacgcgatttggattggtgattataagaccggggctgct
ccgcgtggcggcaccgtcccgtcgtcttacatggtccaactggcgctctaccgttccgcc
gtgtcgccgctctaccctggccgggtcgtgcgggctttcctgatctggaccgaagggccg
ctcgtcatggaacttgcgtccggcgatctcgatgcggcgctttcgacgctcgggccgcgt
tga
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