Lichenihabitans sp. PAMC28606: LGH83_07770
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Entry
LGH83_07770 CDS
T07621
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz03030
DNA replication
liz03430
Mismatch repair
liz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGH83_07770
03430 Mismatch repair
LGH83_07770
03440 Homologous recombination
LGH83_07770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liz03032
]
LGH83_07770
03400 DNA repair and recombination proteins [BR:
liz03400
]
LGH83_07770
Enzymes [BR:
liz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGH83_07770
DNA replication proteins [BR:
liz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGH83_07770
DNA repair and recombination proteins [BR:
liz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGH83_07770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_assoc_2
AAA_30
AAA_18
AAA_lid_RFC1
AAA_19
DNA_pol3_delta_C
Rad17
RCF1-5-like_lid
AAA_33
SRP54
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
UDL96609
LinkDB
All DBs
Position
complement(1643830..1645731)
Genome browser
AA seq
633 aa
AA seq
DB search
MLSGIVSDRPAPVQTTPYRVLARKYRPSSFDDLIGQSAMVRTLSNAFDLNRIHQAYLLCG
VRGVGKTTTARIMARALNYHLPASADRPALDAPSIVMPALGTHCQAIIESRHVDVIEMDA
ASHTGIDDIRELIDGARYRPVMARTKVYIIDEVHMLSKAAFNGLLKTLEEPPEHVKFLFA
TTEIDKVPITVRSRCQRFDLRRVEAPDMIGHLAGICAKEDVRIDPEALALIARAAEGSVR
DALSLLDQAIAHGGGGANGAIDPAAIRVMLGLADRARIIDLFEAVMKGDIATALDGMKAL
YDEGADPGGMLAALADFVHLVTRLKLVPDAAKDSSLTGEERARGLDFACKLSLPVLTRAW
QMLAKGLADVKDAPRPLAAADMVLVRLAYAADLPTPDDVIRRLSAAQAGGVASQTVVASV
PAPSGVAPVEPSGGGLRRLGSGGALPQSVPQAALVASPPQASLAPQAAPAPPPVLPQTLQ
DVVALAIANRDIQLKMALEKDVRIVRFEPGSIEFETVPGASPQLAAHVMRRLNEWTGIRW
MVAVAREGGGATLRELADAETASRRKSLEAHPVVSRIMELFPGSRIVDVTDMKPDLPPPE
PTVPVMGDDEVGYADAGDPNAGDPDDGYSEDDL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccggcatcgtctccgaccgtcctgcgccggtccagacgacgccctatcgcgtg
ctcgcccgcaaatatcgcccgtccagctttgacgatctgatcgggcagagcgcgatggtc
agaaccctgtccaacgccttcgatctcaaccgcatccaccaggcctatctgctctgtggc
gtgcgcggcgtcggcaagaccacgacggcccgcatcatggcgcgagctttgaactaccat
ttgccggcgtccgccgatcggcccgctctcgacgcgcccagcatcgtcatgccggcgctc
ggcacacattgtcaggccatcatcgaatcgcgacatgtcgacgtgatcgagatggatgcg
gcctcgcataccggcatcgacgatatccgcgaattgatcgacggcgcgcgctatcgcccc
gtcatggcgcggaccaaagtctacatcatcgacgaggttcatatgctgtccaaggcggcc
ttcaacgggctgctgaagacgcttgaggagccgcccgaacatgtgaaatttctgttcgcc
acgaccgagatcgacaaggtgccgatcacggtgaggtcgcgctgtcagcggttcgacctc
cgccgcgtcgaggcgcccgacatgatcggccatctggccggcatctgcgcgaaggaggac
gtccgcatcgatccggaggcgctggccctgatcgctcgtgcggccgagggctccgtccgc
gacgcgctgtcattgctcgaccaggccattgcccatggcggcgggggagcgaacggagcg
atcgacccggccgcgatccgggtgatgctcggcctcgccgaccgggcccgcatcatcgat
ctgttcgaggctgtgatgaagggggacatcgcgaccgcgctcgatggcatgaaggcgctc
tatgacgaaggcgccgaccccggcgggatgctggcggcgctggctgacttcgtccatctc
gtgacgcgcctgaagctcgtgcccgatgcagccaaggactcatcgttgacgggcgaggag
cgcgctcgcgggctcgatttcgcttgcaagctcagcttgccggtgctgacgcgcgcctgg
cagatgctggccaagggtttggccgacgtgaaggatgcgccaagaccgctggcggccgcc
gatatggtgctggtgcgcctcgcctatgcggccgatctgccgacgccggatgacgtcatc
cggcgcctctccgccgctcaggctggcggtgtcgcgtcacaaaccgtggttgcaagcgtg
cccgcgccgtccggggttgcacccgtggagccgtcgggtggcggattgcggcggctcggt
tcgggcggggccctgccgcaatccgtgccgcaggccgcactggtggccagcccgcctcag
gcgagcctcgctccgcaggccgcccctgcgccgccgcctgttctcccgcagacactgcag
gatgtcgtggctctggcgattgccaaccgtgacattcagctgaagatggcgctcgagaag
gacgttcgcatcgttcgtttcgagccgggcagtatcgagttcgagacggttccgggcgcg
tctccacagcttgcggcccatgtgatgcgtcggctcaacgagtggaccggcattcgttgg
atggtggcggtcgcacgcgaaggcggcggtgcgaccttacgcgaattggcggatgccgag
accgcgtcgcggcgcaaatctctggaagcgcatcccgtggtcagccggatcatggaactg
tttccagggagccgcatcgtcgatgtgaccgacatgaagccggatctgccgccacccgaa
ccgacggtgccggtgatgggcgacgacgaagtgggttacgcagatgcgggggacccgaac
gcgggcgacccggatgatggatatagcgaggacgacctctag
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