Lichenihabitans sp. PAMC28606: LGH83_07830
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Entry
LGH83_07830 CDS
T07621
Name
(GenBank) B12-binding domain-containing radical SAM protein
KO
K22705
hopanoid C-2 methylase [EC:2.1.1.-]
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LGH83_07830
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GFIT
Motif
Pfam:
DUF4070
Radical_SAM
B12-binding
DUF2840
DUF364
Motif
Other DBs
NCBI-ProteinID:
UDL96087
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Position
complement(1657344..1658966)
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AA seq
540 aa
AA seq
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MRCTVPVTRERRILCVFPAYTPSFGTFSGAYSLMNVQAFMPPQGLLVIAAYLPERWSMRF
IDENLRAAADEDFAWADAVFVSGMHVQEPQIRDIHERAKQHGKVTALGGSSASAAPEKYA
YFDYLHIGELGDATDRLVEILDADVTPPASQIVLETKDRTPLSDFPLPSYSALPLKKYLL
GSLQFSSGCPYRCEFCDIPALYGRQPRLKSVEQLLAELDAFIAQPSHPAVIYFVDDNFIG
NRKATKDMLPHLVAWQKKHAYPLQFACEATLNIAKQTDILELMREAGFFTVFVGIETPEL
DALKSIAKDHNNAVPMMGAIKTLNDYGLEVTSGIILGLDTETDASENLLKEFVDRSAVPV
LTINLLQALPKTPLWDRLTKENRLVNDPSLESNVRFLRPHDEVVASWRRAIAHAYAPENI
FARFRYQMDHTYGNRMKTPARGKLTRSNLRRAFIMGKNIIWQIGVKSDYRGEFWRSAWHA
AKKGQIEAIFNMGFVCHHLIRFTREALRGEHNASFYAAKASAKEAANASSVSVNELQRSA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctgcaccgtccctgtgacccgcgagaggcgcattttgtgcgttttcccggcttat
actccttccttcggcacgttctcgggtgcctattctttgatgaacgtccaggcgttcatg
ccgccccaagggctcctggtcatcgcggcctacctgccggaacgctggtcgatgcggttc
atcgacgaaaatcttcgcgccgccgctgatgaggatttcgcatgggccgacgcggtgttc
gtcagcggcatgcatgtgcaggagccgcagatccgcgacatccatgagcgcgccaagcaa
cacggcaaggtcacggcgctcggtggctcatcggcctcggccgcacccgaaaaatacgct
tatttcgactatctgcacatcggcgaactcggcgacgccaccgaccgcttggtcgagatc
ctcgacgcggatgtgacgccgccggcctctcagatcgtgctcgagaccaaggatcggaca
ccgctcagtgactttccgctgccgtcctattcggcgctgccgcttaagaaatacttgctc
ggatcgctgcaattttcgagcggttgcccgtatcgatgcgagttttgcgacatcccggct
ctctacggacggcagcctcggctgaagtcggtcgagcagttattggcggaactcgacgcc
ttcattgcgcagccgtcgcatccggccgtgatctattttgtcgacgacaattttatcggc
aatcgtaaggccacgaaggatatgctaccgcatctcgtcgcatggcagaagaaacatgcc
tatccgttgcaatttgcctgcgaagcgacgctgaacatcgccaagcagaccgatattctc
gagttgatgcgtgaggcggggttcttcaccgttttcgtcgggatcgagacgcccgaactc
gatgcgctcaagtcgatcgccaaagatcacaacaacgccgttcccatgatgggcgcgatc
aagaccttgaacgattatgggctggaggtgacctccggcatcattctcgggctcgatacg
gagaccgacgcgtccgagaacctcctcaaggaattcgtcgaccggtcagccgttccggtg
ctgaccatcaatcttcttcaggcactgcccaagacgccgttatgggatcggctcacgaaa
gaaaatcggctcgtcaacgatccgtcgctcgagtcgaatgtccgcttccttcggcctcat
gatgaagtagtggcgagctggcgtcgggccatcgcgcatgcctatgcgcctgaaaacatc
ttcgcgcggttccgctatcagatggatcacacttacgggaaccggatgaagacgccggcg
cgcggcaagctcacccgctcgaacctgcgtcgtgctttcatcatgggcaagaacatcatt
tggcagatcggcgttaaatccgactatcggggcgagttctggcgctcggcttggcatgcg
gccaagaaggggcagatcgaagcgatcttcaacatgggtttcgtctgccatcacctgatc
cgcttcacgcgagaagcgctgcgcggcgagcataacgcctccttctatgccgcgaaggcg
agcgccaaagaggcggcgaatgcctcgtctgtttcggtgaacgaactgcagagatcagcc
tga
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