Lichenihabitans sp. PAMC28606: LGH83_08320
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Entry
LGH83_08320 CDS
T07621
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGH83_08320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
liz02000
]
LGH83_08320
Transporters [BR:
liz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LGH83_08320
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
PD40
Motif
Other DBs
NCBI-ProteinID:
UDL96172
LinkDB
All DBs
Position
complement(1768228..1769838)
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AA seq
536 aa
AA seq
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MSDRLRVRLLAAVTLATALGLAWPSGRSAVAATPADTLVMAKNIDDMISLDPAECYELTG
VEIDSNIYDRIIRNDPHDVTKLVGGAAESWIVSPDGKTLTFKLRPTMTFASGSPVTAEDA
AFSLARVIKLNKSPAFLIDQLGWTKDNVDAMVKALDPTTLQITIGPNYSPSLVLALLSSI
VGSVVEKSVVMQHDQGGDLGNAWLKTHSAGGGAFTLKSWKANESVVLDANPTYREGAPPL
KRVVIRHVPEAAAQRLLIEKGDADIARDLTTDQIASIASNKDVTIVRSPQATLHYVGLNV
KAAPLDNPKVRLALHYLVDYDGMAGSFLKGQYQVHQTFWPSGFWAALDKNPFNFDPAKAK
SLLAEAGYPNGFDITLDASNTAPYINIAQAIQANMAQGGVRVTIIPGEQKSVITKFRARQ
HQMLLIYWGPDYMDPHTNADSFARNTDNSDNPPTKPLAWRNSWLIPEISKMTEAAVEERD
LGKREQMYKDLQQKLLDDSPFIIMFQEVKQTAERANVKNFILGPTQDVVFYGMTSK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcgtttgagggtgcggctgctggcggccgtgacgctggccacggcgctcggc
ttggcgtggccgtccgggaggtcggctgtcgccgcgaccccggccgacacgctcgtcatg
gccaagaacatcgacgacatgatcagcctcgatccggccgaatgctatgagctgaccggt
gtcgagatcgacagcaacatctacgaccggatcattcgtaacgatccgcatgatgtcacc
aagctggtgggtggggcggccgaaagctggatcgtgagcccagacggcaagaccctgacg
ttcaagctgcggcccaccatgacattcgcgtcggggagccccgtgacggcggaggatgcc
gctttctcgctcgcccgtgtaatcaagctgaataaaagtccggcgtttctgatcgaccaa
ctcggttggaccaaggacaatgtcgacgcgatggtcaaagcgctcgacccgacgacgctg
cagatcaccatcgggccgaattattcgccgtcgctggtgcttgcgctgctgtcgtcgatc
gtcggttccgtggtcgagaaatcggtcgtcatgcagcacgaccaaggcggcgacctcggc
aacgcgtggctgaagacccattcggccggcggcggcgccttcacgctgaagtcctggaag
gccaacgagagcgtcgtgctcgatgccaacccgacgtaccgcgaaggtgcgccgccgctg
aaacgcgtcgtgatccgtcacgtgccggaggccgcggcgcagcggctgctcatcgaaaag
ggtgatgccgacatcgctcgtgacctcacgaccgaccaaatcgcgagcatcgccagcaat
aaagacgtgacgatcgtgcgctcgccgcaagcgacgctgcattatgtcgggctgaacgtg
aaagctgcgccgctcgacaacccgaaggtgcggctcgccttgcactatctcgtcgattac
gacggcatggccggctcgttcctgaaggggcagtatcaggttcaccagacattctggccg
tccggcttctgggccgcgctcgacaagaatccctttaacttcgaccccgccaaagccaag
tcgctgctggcggaggccggctaccccaacggcttcgacatcacgctcgatgcgtccaac
acggccccctacatcaatatcgcgcaggccattcaggccaacatggcccagggcggcgtc
cgcgtgacgatcattccgggtgagcagaaatccgtcatcaccaagttccgcgcccgccaa
caccagatgctgttgatctattggggtcccgactacatggacccgcataccaatgccgat
agtttcgcccgcaacaccgacaattccgacaatccgccgaccaagccgctggcttggcgc
aattcctggctgatccccgagatcagcaaaatgaccgaagcggccgtcgaggagcgcgat
ctcggcaagcgcgagcagatgtacaaggatctgcagcaaaagctgctcgacgacagccct
ttcatcatcatgttccaggaagtgaagcagacggccgagcgggccaatgtcaaaaacttc
atcctcggcccgacgcaggacgtcgtcttctacggcatgaccagcaaataa
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