Lichenihabitans sp. PAMC28606: LGH83_08380
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Entry
LGH83_08380 CDS
T07621
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liz03400
]
LGH83_08380
Enzymes [BR:
liz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
LGH83_08380
DNA repair and recombination proteins [BR:
liz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
LGH83_08380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
UDL96181
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Position
1780404..1782026
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AA seq
540 aa
AA seq
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MTRVKAPSKGEAASPTLKTLRFVLGDQVSHEISSLSGLDAQRDVVLMVEVADETTYVGHH
KQKIAFIFSAMRHFAAELTATGVTVDYVKIDDAGNAGSFTGELQRAVVRHAPDRVVVTEP
GEWRVWEMMRVWSSELGLPVTIEDDDRYFCSRGRFARWAEDRKSYRMEFFYREMRRETGL
LMRGDEPEGDRWNFDTENRKRLPATVHEPNRRRFEPDAMTREVLDLVAIRFSHHFGDLDG
FGWAVTRADALEALEHFIRACLPLYGDYQDAMKADEPFLFHAVVSPYLNAGLLTAREICV
AAERAYQRGEAGLNAVEGFIRQILGWREYIRGIYWLRMPGYADTNVLGASRPLPWFYWSG
ETDLNCIANAVGDTRRNAYAHHIQRLMVTGNFALLAGIEPRQVEEWYLAVYADAYEWAEL
PNVHGMALFADGGLLASKPYIASGAYIDRMSDYCGPCRYDPKIKSGPNACPFNALYWNFL
IENQNQLGKNARLAMPYRTLAQMRPERRDEIVREAGAFLAGLSSQPIEPSAIPVQATLDV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgtgaaggcacccagcaaaggcgaggcagcaagtccgaccctcaagacgctt
cgtttcgtcctcggcgaccaggtgagccacgagatctccagtctgtccggtctcgacgcg
caacgcgatgtggtcctgatggtcgaggtggcggatgagacgacgtatgtgggccaccac
aagcaaaaaattgcgttcatcttctcggccatgcggcatttcgcggccgaactgaccgcg
accggcgtcacggtcgattacgtcaagatcgacgacgccggtaatgccgggtcgttcacg
ggcgaactgcaacgggcggtggtgcgacatgcgcccgatcgggtcgtcgtcaccgaaccc
ggcgagtggcgcgtgtgggagatgatgcgcgtctggtcgagcgaattgggtttgccggtc
acgatcgaggatgacgatcgatatttctgctcgcgcgggcgcttcgcgcgctgggccgag
gatcgcaaatcctaccggatggagttcttctaccgggagatgcggcgcgaaaccgggctg
ctgatgcgcggcgacgaaccggagggagaccggtggaacttcgatacggagaaccgcaag
cggctgccggcgacagttcacgaaccgaaccgtcgtcgcttcgagccggatgcgatgacg
cgcgaggtgctcgacctcgtcgccatacgcttttcgcatcatttcggcgatctcgacggg
ttcggctgggcggtcacgcgagccgatgcgcttgaggcattagagcatttcatccgcgcg
tgcctgccgctttatggcgactatcaggacgccatgaaagccgatgagccgttcctgttc
cacgcggtcgtctcgccctacctcaacgccggtttgttgaccgcgcgggagatctgcgtt
gcggccgaacgcgcctaccagcgtggcgaagcgggtttgaacgccgtggaagggttcatt
cggcagatccttggctggcgcgaatatatccgcggtatctactggcttcgcatgccgggc
tatgcggacaccaacgtgctcggcgcgagccgtccgctgccgtggttctactggtcgggc
gagaccgatctgaactgcattgcgaacgcggtcggagacacccgccgcaacgcctacgcc
catcacatccaaagactgatggtgaccggcaatttcgcgcttctggccggtatcgagccg
cgccaggtcgaggagtggtatcttgcggtctatgccgatgcttacgagtgggcggaactg
cccaacgtgcacggcatggcgctttttgccgacggcggcctgttggcgtcgaagccctat
atcgcatccggtgcctacatcgatcggatgtccgattattgtggcccgtgtcgctacgat
ccaaagatcaagagcggcccgaacgcttgcccgttcaacgcactttactggaatttcctg
atcgagaaccaaaaccagctcggcaaaaatgcacggctcgccatgccgtatcggacgctg
gcgcagatgcgaccggagcggcgcgacgagatcgtgcgcgaggctggagcctttttggcc
ggtctgtcgtcacaaccaattgagccgagcgcgataccggtgcaggcgacgctcgatgtt
taa
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