Lichenihabitans sp. PAMC28606: LGH83_09000
Help
Entry
LGH83_09000 CDS
T07621
Name
(GenBank) transcriptional repressor
KO
K09823
Fur family transcriptional regulator, zinc uptake regulator
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGH83_09000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
liz03000
]
LGH83_09000
Transcription factors [BR:
liz03000
]
Prokaryotic type
Helix-turn-helix
Fur family
LGH83_09000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FUR
PadR
HTH_20
TrmB
HTH_IclR
HTH_5
HTH_12
Dimerisation
Penicillinase_R
Motif
Other DBs
NCBI-ProteinID:
UDL96293
LinkDB
All DBs
Position
1898344..1898820
Genome browser
AA seq
158 aa
AA seq
DB search
MSTSHVNSHEPKVTGDWLHRVEELCGKRGLQLTALRRQVTEILARAPASLTAYEIIDELG
RVQGRQIGPPTVYRTLDFLTENGFVVKIESRNAFARCDCPGHHHHGALLICSTCGRTDEI
DSDALDGVLRSVATDSGFTIKRQMVELEGLCDRCRPAV
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacgtcccacgtcaactctcatgagccgaaggtgaccggcgactggctgcaccgc
gtcgaggaactctgcggcaagcggggcctccaattgacggccctccgccgtcaggtgacc
gaaatcctggcccgcgcgcctgcctcgctgaccgcctacgaaattatcgacgaactcgga
cgcgtccagggccgccaaattggtccgccgaccgtctatcgcacgctcgattttctgacc
gagaacggtttcgttgtgaagatcgagagccgcaacgccttcgcgcgctgcgattgcccc
gggcatcatcaccatggggctttgctgatctgctctacctgcgggcggacggatgaaatc
gacagcgacgcgcttgatggcgtgcttcggtcggtcgcgaccgacagcgggttcacgatc
aagcgccagatggtcgagctcgaagggctgtgcgaccgctgccgtccggccgtctag
DBGET
integrated database retrieval system
