Lichenihabitans sp. PAMC28606: LGH83_09035
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Entry
LGH83_09035 CDS
T07621
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGH83_09035 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liz03400
]
LGH83_09035 (uvrB)
DNA repair and recombination proteins [BR:
liz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGH83_09035 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LGH83_09035 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF2963
AAA_22
SWI2_SNF2
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
UDL96299
LinkDB
All DBs
Position
complement(1906300..1908978)
Genome browser
AA seq
892 aa
AA seq
DB search
MPKPPKPAPTTSAPTKSPASSRPTRPKASRPDVKPLDEHLAALLNPALNEKRGSGFAEAP
QARFEPAGGAVALADEPQHPRGISGSAATADVLKQLLESGDPRLANRPWVPHRPARPEKS
EGGIQFKLQSEYEPKGDQPTAIRELVEGIQASERDQVLLGVTGSGKTFTMAQVIARTNRP
ALILAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESTINEQI
DRMRHSATRALLERDDCIIVASVSCIYGIGSVETYTAMTFSLKVGDKVDQRQVIADFVAL
QYKRTHIDFTRGTFRVRGDTLELFPAHNEDRGWRIDFFGDEIESIVEFDPLTGKKTNDLS
AVKVYANSHYVTPRPTLLQSIKAIKSELKMRLDELHATGRLLEAQRLEQRTTFDIEMLEA
TGSCQGIENYSRYLTGRLPGEPPPTLFEYLPDNALVFTDESHVTVPQIGAMYKGDFRRKA
TLAEYGFRLPSCLDNRPLRFEEWEAMRPQTVHVSATPGTWEMNQTSGVFVEQVIRPTGLI
DPPVEVRPARAQVDDLLGEVRTVSQAGYRSLITVLTKRMAEDLTEYLHEHGVRVRYMHSD
IDTIERIEIIRDLRLGVFDALVGINLLREGLDIPECALVAVLDADKEGFLRSETSLVQTI
GRAARNVDGRVVLYADKVTGSMERAMAETTRRRAKQVEYNTEHGITPATIKRGIQDILGS
VYEADHVTVDTGLATPAIGHNFKATVADLEKRMRAAAANLEFEEAARLRDELKRMQVAEL
TIGSDPMARQQAVEDKAGAYAGERKYGRAGNMPAGPKAGDARSETRPHKPTSSEMGPHNM
GGGEAAPLTRARKPNLDEMGPNIESRPLSGEGVRREKPDPGVTQWKKGRGRR
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagccgcccaagcccgccccgacgacctcagcgccgaccaagtctcccgctagc
tcccgcccgacgcgccccaaggcgtcccgtccggacgtgaagccgctcgacgaacatctc
gcggcgttgctcaatccggccttgaacgaaaagcgcggctccggtttcgccgaagccccg
caggcgcggttcgagccggctggtggcgcggtggcactcgccgacgagcctcagcatccg
cgcggcatcagcggctcagccgccaccgccgacgtgctgaagcaactgctggagagcggc
gacccgcgcctcgccaaccgaccctgggtgccgcatcgtcccgcgcggccggagaaatct
gaaggcggcatccagttcaagctgcaatccgaatatgagccgaagggcgatcaaccgacc
gcgatccgcgaactcgtcgagggcatccaagcctccgagcgcgatcaggtgctgctcggc
gtcaccggttcgggcaagacgttcacaatggcgcaggtgatcgcccgcaccaatcggccg
gccttgattctcgcgccgaacaagacgctggcggcgcagctctacggtgagttcaagagt
ttttttcccgacaacgcggtcgagtatttcgtctcatactatgattactaccagcccgag
gcctatgtgccgcggtcggacacgtatatcgagaaggaaagcaccatcaacgagcagatc
gaccgcatgcgccactcggcgacgcgtgctttgctcgagcgcgacgattgcatcattgtc
gcgtcggtatcgtgcatctacggcatcggctcggtcgagacctatacggccatgacgttc
agcctgaaggttggcgacaaggtcgaccagcggcaggtgatcgcggattttgtggcgctg
caatacaagcgcacccacatcgatttcacgcgcggtacattccgggtgcgcggcgatacg
ctggagctgtttccggcccataacgaagaccggggctggcgcatcgacttctttggcgac
gagatcgagagcatcgtcgaattcgatccgttgaccggcaaaaagaccaacgatctgtcg
gccgtaaaggtttatgccaattcgcattacgtgacgccgcgcccgaccctgctgcagagc
atcaaggcgatcaagtccgagctgaagatgcggcttgacgaattgcatgcgaccggccgc
ctgctcgaggcgcagcggctcgaacaacgcaccactttcgatatcgaaatgcttgaggcg
actggttcctgccagggcatcgagaactactcgcgctatctcaccggtcgcttgccgggc
gagccgccgccgaccctctttgaatatctgcccgacaacgcgctggtgttcaccgacgag
agtcacgtgacggtgccccaaatcggcgcgatgtataaaggcgactttcgtcgtaaggcg
accctcgccgaatatgggttccgtctgccgtcctgcctcgacaaccggccgctccgcttc
gaggagtgggaggcgatgcggccgcagaccgtgcatgtttcggcgacccctggcacctgg
gagatgaaccagaccagtggcgtcttcgtcgaacaggtgatccgccccaccgggctgatc
gatccgcctgtcgaggtgcggcccgcccgcgcgcaggtcgacgatctgctcggcgaggtt
cggaccgtcagccaggccggttatcgcagcctcatcacagtgttgaccaagcggatggcc
gaggacctgaccgaatatctgcacgagcatggcgtgcgcgtgcgctacatgcacagcgat
atcgatacgatcgagcggatcgagattattcgcgacctgcggctcggggtgttcgacgcg
ttggtcggcatcaacttgctgcgcgaaggcctggatatccccgaatgcgcgctcgtggcg
gtgctggatgccgacaaggaagggtttctccggtcggaaaccagcctcgtccaaaccatc
ggccgcgcggcccgcaacgtcgatggccgtgtcgtgctctatgccgacaaggtcacgggc
tcgatggagcgcgccatggcggagacgacgcgccgccgcgccaagcaggtcgaatataac
accgagcacggcatcacgcccgccaccatcaagcgtggcattcaggacatcctcggttcg
gtctacgaggccgaccatgtgacggtcgataccgggctcgcgaccccggcgatcggtcac
aacttcaaagccacggtggcggatctcgaaaagcgcatgcgcgcggcagccgccaacctc
gaatttgaggaggcggcgcggctccgcgacgagctcaagcgcatgcaggtggccgaactc
accatcggcagcgacccgatggcgcgccagcaagccgtcgaggataaggccggcgcctat
gcgggtgagcggaaatacggccgcgccggcaacatgcccgccggcccgaaagcgggcgat
gcgcgctccgagacgcggccccacaagccgaccagcagcgaaatgggcccgcataatatg
ggtggtggcgaggccgcgccgctcacccgcgcccgcaagccgaatctcgacgagatgggg
ccgaacatcgagtcgcgtccgctctccggcgagggtgtccgccgcgaaaaacccgatccc
ggcgtcacgcagtggaagaagggccgggggcggcggtga
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