Lichenihabitans sp. PAMC28606: LGH83_09290
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Entry
LGH83_09290 CDS
T07621
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00300
Lysine biosynthesis
liz00470
D-Amino acid metabolism
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
liz01120
Microbial metabolism in diverse environments
liz01230
Biosynthesis of amino acids
Module
liz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LGH83_09290 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LGH83_09290 (dapF)
Enzymes [BR:
liz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LGH83_09290 (dapF)
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UDL96344
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Position
1954613..1955488
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AA seq
291 aa
AA seq
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MTSAAAAIDAPLRFAKMNGIGNSILVVDTRGHAALDEATARSLGARPGLGFDQLMAIGDG
RGAGRPPFVDIFNQDGSKAGACGNGTRCVAWFLLEGSDDQSVTVETVAGELVCRRQRDGL
FTVDMGVPHVGWHDIPLRDAIEDTTSFALEPTSAWIEALGPVSAVSMGNPHAVFWIAPDA
PPPPLATLGPALEHHPMFPDRANISFARVMSPTLIHLDVWERGAGLTKACGSAACATLVA
AVRSHRVLRRADVVLPGGTLTIEWRDTDQHVVMTGAVELEHRGLVDRNPTA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagccgctgcagcgatcgatgcgcctttgcgcttcgcgaagatgaacggaatc
ggcaactcgatcctggtcgtcgacacacgcggccatgcagcgctcgacgaggcgacggcg
cgatccctcggcgctcgaccggggctcggtttcgatcaattgatggcgatcggggatggg
cgcggcgcgggacgtccgcccttcgtcgatatcttcaaccaagatgggtcaaaggcgggc
gcttgcggcaatggcacgcgttgcgtcgcatggttcctgctcgaggggagcgacgaccag
tctgtgacggttgaaacggttgcgggcgagttggtctgcaggcgccagcgggacggcctt
ttcacggtcgacatgggggtcccgcatgtcggatggcatgatattccgttgcgtgacgcg
attgaggacacgacatcctttgccctggagccgacctcggcctggattgaggcgctcgga
ccggtgtcggctgtgagcatgggcaacccccatgcagtgttctggatcgcccccgatgct
ccgccgcctccgctcgcgacgctcggccccgccctcgaacatcatccgatgtttccggac
cgcgccaatatttccttcgcccgtgtgatgtcgcccaccttgatccacctcgatgtctgg
gaacgcggtgccggcttgaccaaggcgtgcggctcggctgcttgtgcgacattggttgcg
gcggtgcgtagccatcgtgtcttgcggcgcgccgatgtggtgctgccgggcggaacactg
acgatcgagtggcgtgataccgaccagcacgtcgtgatgaccggggcggtcgagctcgaa
catcggggtctggtcgaccggaatccgacggcttga
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