Lichenihabitans sp. PAMC28606: LGH83_10035
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Entry
LGH83_10035 CDS
T07621
Name
(GenBank) PAS domain S-box protein
Organism
liz
Lichenihabitans sp. PAMC28606
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_4
PAS_9
PAS_8
HATPase_c
Response_reg
GAF_2
GAF
HisKA
PAS_7
PAS_10
PAS_11
Motif
Other DBs
NCBI-ProteinID:
UDL96484
LinkDB
All DBs
Position
2111151..2114972
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AA seq
1273 aa
AA seq
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MQPSDIEDLLRRERELLQDLKTIRVALAAADNSGVTPSGETATTFDQTLLYRAILESATD
YAIIAASLEGRIVEWNVGARRVLGWSQEQIVGQDIRIIFTPEDREAGVPEREMSTAIEAG
HAMDLRWHLRSDGSRFWADGRMMPLKTISGEITGYLKILKDETGLKSSEMQISAHGNVLR
TITDTIDTAIIQVDASHHIVFVNPAAERLLGWSAADLHGRSLYDTLCLSPDADEADTKAL
REVLQTGKVARDVEATFARRDGTPAYLSCSNTPILVDGLVVGAVMAAQDRSARHHADEAN
RAELRRHEALAEVLRAIEAGAGDLDAIVAAVAHGARKVMPQAMGAAVQMIEDEHCVYRAV
ADPAFGAVGLRLPLDRSLSGASLELGRPLISDDTECDDRVDHDLCHRYGIRSIIAVPISR
HGVFVGVFEATATTPQAFGPRDVLVAQILVGHLSTGFAQVDEARALRNMRQSEERLQLAL
HASETIGIWDWDVANDLCYADPRFARLFSVDPAAAAAGLPVADYAPGIFPDDRVWIGIAV
RKALAEGSDYAIEHRVQLADGSIRWLAARGHCYNGPDGRPSRFPGAVVDITERKRIETSL
RTAETNAKLAVRAAGLGLWDYEPAIDVITWDDRCRAIFGLGADVTMSIERLMGHLTPAGR
TNLRMIVQNALADGRLADQAHEFEIQRPDGSDDRWIEVSAQAFFTDGRCSRIIGTIGDIT
DRKRLEAALREDEQRFRSMAETIPQLAWMAAPDGNIFWYNERWFDYTGTTLDEVRGQGWR
IAHHPDMVDDVAHRLHACFRDGTPWEDTFLLRGRDGSYRWFLSRAMPIREENGTILRWFG
TNTDVDDQIRAREAQVRFGEDLERQVASRTQELSLANARLVAEMADRQRAEDALRQSQKM
EAVGQLTGGIAHDFNNLLTGITGSLDLMRKRIAQGRIGELDRYMTAAGTSAQRAAALTHR
LLAFARRQPLDAKPVDANALVASMEDLFQRTLGEAIDISLRLSPDLWTTLCDPHQLENAL
LNLVINARDAMPDGGMLTIETNNIEIDEAEALIDPDRRPGQYVTLQVSDTGMGMEPDVMA
RIFEPFFTTKPIGQGTGLGLSMIYGFARQSEGHVRVESALGLGTTFTLMVPRFAGASQPN
DLASPTSLPATADGETVLVVEDDAVVRALVLDVLRELGYQTLEAPDGMGGLSILQGRARV
DLVVTDVGLPGLNGRQLAEMARASRPGLKVLFITGYAENAAFGHGAPDTSMQMITKPFAI
NDLATKVREMLTQ
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
ttgcagccgagcgatatcgaggatcttctacgccgcgagcgggagcttcttcaagatctc
aaaaccattcgcgtcgccctcgcggcggccgacaactcaggcgtgactccgtccggcgaa
accgcgacgacattcgaccagacgctgctttaccgggctatcctcgaaagcgcgaccgac
tatgccatcatcgccgcaagcctcgaggggcggatcgtcgaatggaacgtcggggcacgg
cgggttctcggctggtctcaggagcagatcgtcggtcaggacattcggatcatctttacg
ccggaagatcgagaggccggcgtccccgaacgcgagatgagcaccgccattgaggcgggc
catgcgatggacctgcgatggcacctgcgctccgacggatctcgattttgggccgatggt
cggatgatgccgctaaaaaccatcagcggcgaaatcaccggctacctcaagatcctgaag
gacgaaaccgggctgaaatcctccgaaatgcaaatttcggcgcatggcaatgttctgcgt
accatcaccgacacgatcgataccgcgatcattcaggtcgacgcttcccatcatatcgtc
ttcgtcaatccggctgcggaacggctgctcggctggtcggcggccgatctccacggccgg
tcgctctacgacacgctgtgcttgtcgcctgacgcggatgaggccgacacaaaggcgctc
cgcgaggtcctgcagaccggcaaagtcgctcgcgacgtcgaagcgaccttcgcgaggcgc
gacggcacaccagcctatctgagttgctcgaatacgccgatcctggtcgacgggctcgtg
gtcggggccgtgatggcggcgcaggatcgctcggcgcgccaccatgccgatgaggcgaac
cgagccgagctgcggcgacacgaagcgctcgccgaggttctccgcgcgatagaagcgggt
gcaggcgacctcgacgcaatcgtggcggctgtcgcccatggtgcccgaaaggtcatgccg
caggcgatgggagccgccgtccaaatgatcgaggacgagcattgcgtctatcgcgctgtc
gccgatccggctttcggcgcggtcgggctgcggcttccgctcgatcgaagcctttcggga
gcaagccttgagctcgggcggcccctcatcagcgacgatacggaatgcgacgatcgcgtc
gaccatgatctctgtcaccggtacggcatccgctcgatcatcgcagtgccgatctcgaga
catggcgtgttcgtcggtgtcttcgaggcgacggcgacgacgccccaggccttcgggccg
cgtgacgttttggtggcacaaatcctggtcggccatctctcgacggggtttgcccaggtc
gacgaagcgcgggccttgcggaacatgcgtcaaagcgaagagcggctgcagctggcgctt
cacgcttcggagacgattggcatctgggattgggatgtggccaatgatctctgctatgcc
gatccgcgcttcgcccgcctgttttcggttgatcccgccgcagcggccgccggccttccc
gtggccgattacgcccccggcatctttcccgacgatcgcgtctggatcggcatagcggtc
cgcaaggcgctcgccgaaggcagcgattacgcgatcgagcatcgcgttcaactcgcggac
gggtccattcgctggctcgcggcgcgcggccattgttacaacgggccggacggtcgtccg
agccgttttccaggtgctgtcgtcgatataacggagcgcaagcggatcgagacatcgctc
cgcaccgccgaaaccaatgcgaaactcgcggtccgcgcggctggcctcggcttgtgggat
tacgagcccgcgatcgacgtcatcacctgggatgatcgatgtcgcgcgattttcggcctc
ggcgccgatgtcacgatgagcatcgaacgcttgatgggccatctgacgccggccggacgc
accaatctccgcatgatcgttcaaaacgcgttggcggatggacggcttgccgatcaagcg
catgagttcgaaattcagcgacccgacggcagcgacgatcgctggatcgaagtgtcggct
caggccttcttcactgacgggcgctgcagccgcatcatcgggacgatcggcgacatcacc
gaccgcaagcgcctggaagcagccttacgtgaagacgagcagcgatttcgctcgatggcc
gaaaccattccgcagctggcctggatggccgcaccggacggcaacatcttttggtataac
gagcgctggtttgactataccggcacgacgctcgacgaggtgcgcggtcaaggctggcgc
attgcccatcatcccgacatggtcgacgatgtggcacatcggctccacgcctgtttccgc
gacggcacaccctgggaggacacctttctgctgcgcggccgcgatggctcgtaccgctgg
ttcctctcgcgcgcgatgccgatccgcgaggagaatggcacgatcctccgctggttcggg
accaataccgacgtcgacgatcagattcgtgcgcgcgaggcgcaagtccgattcggcgag
gatctcgagcggcaggtcgcgtcccgcacgcaggaactcagcctcgccaatgcacgattg
gtggccgaaatggccgaccgacagcgtgccgaggacgcgctccgccaatctcagaagatg
gaggcggttgggcaactcaccggcggcatcgcgcatgacttcaacaatctgctgaccggc
atcacgggcagcctggacctgatgcgaaaacgcattgcccagggcaggatcggggaactc
gatcgctacatgacggcagcgggaacgtcggctcaacgcgcggccgcgctcacgcatcgc
ttgctcgcctttgcgcgccgccagccgctggacgccaagcccgtcgacgccaacgcactt
gtggcctcgatggaggatctcttccaacgcacgctcggcgaagcgattgatatcagcctg
cgcctgtcgccggatctctggaccacgttgtgcgatccgcatcagctcgaaaatgcgctt
ttgaaccttgtgatcaatgcgcgcgatgcgatgcctgatggcggtatgttgacgatcgag
accaacaatatcgagatcgacgaggctgaagccctgatcgatcccgatcgacggcccggg
caatatgtgacgttgcaggtcagcgataccggcatgggcatggagccggacgtgatggct
cgcatcttcgagccgtttttcaccaccaagccgatcggccagggaaccgggcttggcctc
tcgatgatctatggtttcgcgcgccaatccgaaggtcacgtcagggtcgagtcggcgctt
ggcctcggcacgaccttcacgctgatggtgcctcgcttcgccggagcgagccaaccgaac
gatctcgcgtcacccacctctcttccggcgacggcggatggcgaaacggttctcgtggtc
gaggacgatgccgttgtgcgcgcgctcgtgctcgatgtgctccgcgaactcgggtaccag
accctcgaagccccggacggcatgggcggtctctcgatcctgcagggtcgggcacgggtc
gatctcgtcgtgacggacgttggccttcccggcctgaatgggcgtcaattggccgaaatg
gcacgcgcgagccggccgggtctgaaggtgttgttcatcacgggttatgcggagaatgcc
gccttcgggcatggcgcgcccgacacatcaatgcagatgatcaccaagccattcgcgatc
aacgatctcgccaccaaggttcgcgagatgctgacacaatga
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