Lichenihabitans sp. PAMC28606: LGH83_10345
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Entry
LGH83_10345 CDS
T07621
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00220
Arginine biosynthesis
liz00240
Pyrimidine metabolism
liz00250
Alanine, aspartate and glutamate metabolism
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
liz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LGH83_10345 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LGH83_10345 (carB)
00220 Arginine biosynthesis
LGH83_10345 (carB)
Enzymes [BR:
liz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LGH83_10345 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
GARS_A
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UDL96646
LinkDB
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Position
complement(2182330..2185674)
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AA seq
1114 aa
AA seq
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MPKRTDISTVMIIGAGPIVIGQACEFDYSGTQACKALREEGYRIVLVNSNPATIMTDPDM
ADRTYVEPITPDIVAQIIALERHAVPGGFALLPTMGGQTALNCALALEKMGTLAEHDVEL
IGATAAAIDKAEDRELFRDAMTKIGLDTPRSHQISSLSEALAIIDDIGLPAIIRPSFTMG
GTGGGIAYNKAEFIDIIERGIDASPTSNVLVEESVLGWKEFEMEVVRDKADNCIIVCSIE
NIDPMGVHTGDSITVAPALTLTDKEYQIMRDASLAVLREIGVETGGSNVQFAINPENGRM
IVIEMNPRVSRSSALASKATGFPIARVAAKLAVGYTLDEIANDITGGATPASFEPTIDYV
VTKIPRFAFEKFPGADPILTTSMKSVGEAMAIGRTFAESLQKAFRSLETGLSGLDEIEIE
GLGRGDDRATLRAALGRPTPDRLLNVAQALRHGMSHDDIYEVCRIDRWFIERLQEIVDLE
TKVRRFGVPKTAGNLRSLKAAGFADSRLAALSGMAETEIATLRHALGVVPVYKRIDTCAA
EFASPTAYMYSTYAAPFGSHGVLAGAPADEARPTDRDKIVILGGGPNRIGQGIEFDYCCC
HACFALSDAGYETIMINCNPETVSTDYDTSDRLYFEPLTAEDVLAILRKEQENGTLKGVI
VQFGGQTPLKLATALEKAGIPVLGTSVDSIDLAEDRDRFKRLLDKLGLKQPKNGIAYSVE
QSRLVVASLGLPLVVRPSYVLGGRAMAVIRDGQALDDYLLGTLPGLVPSDVKARYPNDKT
GQINTVLGTNPLLFDRYLSDATEIDVDALCDGTEVFVAGIMEHIEEAGIHSGDSACSLPP
HSLTPEVMAEIEAQTKKLALALDVGGLMNVQYAIKDGEIYVLEVNPRASRTVPFVSKVIN
LPLAKIASRVMAGEKLGSFDLGSRAKEQHVGVKEAVFPFARFPNVDTVLGPEMRSTGEVI
GLARSFAVAFAKSQLGGGTKVPTAGTVFVSVKDSDKPRIMASIELLLDLGFKIQATGGTL
RALQASGLSAQKINKVSEGRPHVVDLIKNGEIQLVINTTEGAQALSDSRSIRQAALLHKV
PYYTTLAGAVAATQGIQAYRGGDLQIRALQDYFH
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacggaccgatatatcgacagtcatgatcatcggcgccggtccgattgttatc
gggcaagcgtgtgaatttgattattccgggacccaggcctgcaaggctctgcgcgaggaa
ggctatcggatcgtcctggtcaattcgaacccggccacgatcatgaccgatccggacatg
gccgatcgcacctatgtcgagccgatcacgcccgatatcgtggctcagatcatcgcgttg
gagcggcacgccgtgccgggcggcttcgcgctcctgccgacgatgggcggccagacggcg
ctgaattgcgcgctggcgctcgaaaagatgggcaccttggctgagcatgatgtcgaattg
atcggcgccacggcggccgcgatcgacaaggccgaagatcgcgaattattccgcgacgcg
atgacgaaaatcggcctcgatacgccccgctcgcatcagatcagctccttgtccgaagcc
ttggcgatcatcgacgacatcggcctgccggccatcatccggccgtccttcacgatgggc
ggcaccggcggcggcatcgcctacaacaaggccgaattcatcgacatcatcgagcgcggc
atcgatgcctccccgaccagcaacgtgttggtcgaggaaagcgtgctgggctggaaggag
ttcgagatggaggtggtccgcgacaaggcggacaattgcatcatcgtctgctcgatcgaa
aatatcgatccgatgggcgtccatacgggcgacagcatcacggtcgcgccggctctgacg
ctgaccgacaaggaatatcagatcatgcgggacgcgagtctcgcggtcctgcgtgagatc
ggcgtcgaaaccggcggctccaacgtgcaattcgcgatcaaccccgagaacgggcgcatg
atcgtgatcgagatgaatcctcgcgtgtcgcggtcctccgccttggcgtcgaaagcgacc
ggcttcccgatcgcccgcgtggccgcaaaactcgcggtcggctacacgctcgacgagatc
gccaacgacattacgggcggcgccacgccggcctcgttcgaacccacgatcgactatgtg
gtcacgaaaatcccgcggttcgcatttgagaaatttccgggcgccgacccgatccttacg
acctcgatgaagtcggtcggcgaagcgatggcaatcggccggacctttgccgaaagcttg
caaaaggcgtttcgctcgctcgaaaccggcttgtcgggtctcgacgagatcgagatcgaa
ggcctcggacggggcgacgatcgggcgacactgcgggccgcgctcggccgcccgaccccc
gatcggctgctcaatgtcgcgcaggcgctccgtcacggcatgagccacgacgatatctac
gaggtttgccggatcgatcgctggttcatcgagcggttgcaggagatcgtcgatcttgaa
accaaggtccgtcgcttcggggtgccgaagaccgccggcaacctgcgaagcctcaaggcg
gccggctttgccgattcgcggctggccgcgctatcgggcatggccgaaacagagatcgcg
accttgcgacacgcgctcggcgtcgtgccggtctataagcggatcgacacctgcgcggcc
gaattcgcctcgccgaccgcctacatgtattcgacctatgcggctcctttcggaagccat
ggcgtgctcgccggtgctcccgccgacgaggctcgcccgaccgatcgcgacaagatcgta
attctgggcggtggtccgaaccggatcggtcaagggatcgaattcgactattgctgctgc
catgcctgtttcgcattgagcgacgccggctacgaaaccatcatgatcaattgcaacccg
gagaccgtgtcgaccgattatgacacctccgaccgtctctatttcgagccgctgacggcc
gaagacgtgctggcgatcctccgcaaggaacaggaaaacggaaccctgaagggcgtcatc
gtgcagttcggcggccagacgccgctgaagctcgcgaccgcgctcgagaaggccggcatt
ccggtgctcggcacctctgtcgattcgatcgatctcgcggaggatcgcgaccgcttcaag
cggctgctcgacaagctcggattgaagcagccgaagaacggcattgcctattcggtcgag
caatcgcgcctcgtcgtcgcaagcctcggccttccgctggtcgtgcgaccctcctatgtg
ctcggcggccgtgccatggcggtgatccgggacgggcaggcactcgacgattatctgctc
ggcacattacccgggctggtgccgtccgacgtgaaggcgcgttatccgaacgacaagacc
ggtcagatcaacacggtgctgggcaccaatccgctgctgttcgaccgctatctgtcggac
gcgaccgagatcgacgtcgatgcgctttgcgacggcacggaggtgttcgtggccggcatc
atggagcatatcgaggaggcgggtatccattcgggcgactcggcctgctcgttgccgccc
cactcgctgacgccggaggtcatggccgagatcgaggcacagaccaagaagctcgctctg
gcgctcgacgtcggcggcttgatgaacgtgcaatatgcgatcaaggacggcgagatctac
gtgctcgaggtcaacccgcgtgcctcccgtaccgtgccgttcgtctccaaggtcattaac
ttgccgctggccaagatcgcctcgcgcgtgatggcgggcgagaagctcggatccttcgat
ctcggctcgcgggccaaagaacagcatgtcggcgtgaaagaagccgtcttccccttcgct
cgttttcccaacgtcgataccgtgctcggcccggaaatgcggtcgaccggcgaagtgatc
gggcttgctcgctcgttcgccgtggccttcgcgaaaagccaactcggcgggggcaccaag
gtaccgaccgccggtacggttttcgtgtcggtaaaggacagcgacaagccacgcattatg
gccagcatcgaattgctgctcgatctcggcttcaagatccaggcgacgggtggcaccctg
cgggcgctgcaggcgtctgggctgtcggcgcagaagatcaacaaggtgtcagagggtcgg
ccgcatgtggtcgacctcatcaaaaatggcgaaattcaattggtgatcaacaccaccgaa
ggcgcgcaggcgctgtccgactcgcgctcgatccgccaggccgcgctgcttcacaaagtg
ccgtattacacgacgctagcaggcgcggtggcggccacgcaggggatccaagcctatcgc
ggcggtgatctgcagatccgcgccttgcaggattacttccactaa
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