Lichenihabitans sp. PAMC28606: LGH83_10420
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Entry
LGH83_10420 CDS
T07621
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
liz01002
]
LGH83_10420
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
LGH83_10420
Peptidases and inhibitors [BR:
liz01002
]
Cysteine peptidases
Family C82
LGH83_10420
Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LGH83_10420
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Big_1
Motif
Other DBs
NCBI-ProteinID:
UDL93046
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Position
2198982..2200490
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AA seq
502 aa
AA seq
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MMGLAFRKQIWSSSVGLASLAAVFSTTAIGGHAFAQATSLPAPITTALLPAPSAPPAAKT
EAPALIPAPALPAQPAIPGTAASVPPATLAAPVAPPVAAALKPKRKVPIAPPRETALSTD
PNPTLTPETFFATAKASERYAAIADAGGWPVIEGPLSPSSKGRPVSTLRLRLAIEGDLNA
AGHSGAGVNPQESPSMFDTRWTPDLTSAVKRFQIRHGLKDNGVVAGATLKALNVSARTRF
TELASSAQRLAGRNFSFPERYVVVNLPSASVEAVENGQVVHRYVAVVGNAEHASPEVDAK
VVAVNLNPTWTVPTSIIKNEIIPKMQKDPGYLAREKIRVLDNAGNTVNPALIDWKSQRAV
NYTLRQDSGKANSLGSIRINMPNKYAVYMHDTPAKHLFGGDYRFLSHGCVRVQGVYDLAA
WLLRDSLGAPDGLWSREAIEARIADGQHEEVRLKQAVPVSWVYLTGWANGDGVANFRDDV
YGIDTVGAPAEARADPAVVPSN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtctcgctttccggaaacagatctggtcgtcgtccgtcggactggcgtccctt
gcggccgttttttccacgacggcgattggcggccatgctttcgcgcaagcgacaagcctt
cccgccccgatcacgacggctctgctaccggctccgagcgcccctcccgccgcaaagacg
gaagcgcccgccctgatccccgcccctgcgcttccggctcagccggcaattccaggtacg
gccgcatcggttccgccagcgaccctcgcagcaccggtcgccccgcccgtggctgcagcc
ttgaagccgaagcgcaaggtgccgatcgcgccgccgcgtgaaaccgctttatcgaccgac
ccgaatccgacgttgacgccggagacgtttttcgcaaccgcgaaagcgtctgagcgctat
gccgcaatcgcggatgctggcggctggccggtgatcgaaggaccgctgtcaccgagcagc
aagggccgccccgtttcgacgctgcgtctgcgtctcgccatcgaaggcgacctcaatgcg
gctgggcattccggagcgggcgtcaatccgcaagaatcgccaagcatgttcgacactcgt
tggacacctgacctgacgagtgcggtcaagcgctttcagatcaggcatggcttgaaggac
aatggcgtcgtggccggcgccacgttgaaagccctgaacgtctcggcccgaacccggttc
accgaactggcatcgagcgcgcagcggcttgcgggtcggaatttctcgttccccgaacgt
tatgtggtggtcaatctcccgtcggcctcggtcgaggcggtcgagaatggacaagtcgtg
catcgttacgtggcagtcgtcggcaatgccgaacatgcctcgccggaagtcgatgccaaa
gtcgtcgcggtcaatctgaacccgacctggacggtcccgacctcgatcatcaagaatgag
atcatccccaagatgcagaaggatccgggttatctcgcgcgcgagaaaatccgcgtcctc
gacaatgccggcaacacggtcaatccggcgttgatcgattggaagagccagcgggcggtc
aactacacgcttcggcaggattcgggaaaagccaattcgctcggctccatccgcatcaac
atgccgaataaatacgccgtctatatgcatgacacgcccgccaagcacctgttcggcggc
gattaccggtttctctcgcatggttgcgtgcgggttcagggcgtctacgatctcgcggcc
tggctgctgcgcgatagcctcggcgcaccggatggactgtggagtcgcgaagccatcgag
gcccggatcgccgatgggcagcatgaggaagtgcgcctgaagcaggcggttccggtgtcc
tgggtttacttgaccggatgggccaatggcgacggcgtcgccaacttccgcgacgatgtc
tacggcatcgacacggtcggggccccggccgaagcacgggctgacccggcggtcgtcccg
tcgaactga
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