Lichenihabitans sp. PAMC28606: LGH83_10880
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Entry
LGH83_10880 CDS
T07621
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz02010
ABC transporters
liz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LGH83_10880
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
LGH83_10880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
liz02000
]
LGH83_10880
Transporters [BR:
liz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
LGH83_10880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
UDL93128
LinkDB
All DBs
Position
complement(2312836..2313894)
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AA seq
352 aa
AA seq
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MGAPLLVAGLGPHGERAAPSDRIVLSDADVTFARERAFKVAVVLHTTESDWAKQQLAGMG
AILRDHAAAITAVVDCGFSLDRQAQALNHLAGEKLDGVISIPLGNSRAVTDAYRAVSAAG
KNLVLLDNAPVGLMPASDYVSVVSADNFGLGEIAAAQLSPYVPQGGKIGLVAFRLGFFAT
TQREISFRRWIERHRPDVVIRQVKFEQIDHIESLVGGFLDANTDTAALFAVWDGPALRTM
RAVERRSRSIPMTTVDLGRDIATALAGRRLIKGVAAQRPFDQGRTAANVLLSSLAGNTVP
SWIVLPGLPVTASNVIDAFQQVWHAPPPARLLAALECESTEAANDRTAGLHK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgggagcgccgctgctcgtcgctgggctcggcccgcacggcgagcgggcggccccgtcc
gatcggatcgttctctcggatgcggacgtcacctttgcccgggagcgggccttcaaggtt
gcggtcgtgcttcacaccaccgagagcgactgggccaagcagcaactggccggcatgggc
gccatcttgcgcgatcatgcagccgcgatcacggccgtcgtcgattgtggcttcagcctg
gaccgtcaggctcaggctctcaaccacctggcgggtgagaagctcgatggcgtcatcagt
attccgctcggcaacagccgggcggtaacggatgcctacagggccgtgtccgccgccggc
aagaacctcgtgctgctcgacaacgcacccgttggcctgatgccggcgagcgactatgtc
agtgtcgtgtctgccgacaatttcgggctgggcgagatcgccgccgcgcaactatccccc
tacgtgccccagggagggaagattggcctggtggcctttcggctcggcttcttcgcgacc
acgcagcgggagatttcattccggcgctggatcgagcgccatcggcccgacgtggtcata
cggcaggtcaagttcgagcagatcgatcacatcgagtccctcgtggggggatttctcgat
gccaacaccgatacggctgcactgttcgccgtgtgggacgggcccgcgctgcgcaccatg
cgggcggtcgaaaggcggtcgcggagcattccgatgacgacggtcgatctcggccgggac
atcgcgaccgcgctagctgggcggcggttgatcaagggggtcgctgcccagcgaccgttc
gatcagggccgcaccgcggccaatgtcctgctgtcatccctggccggcaacaccgtgcct
tcgtggattgtccttcccggccttccggtcacggccagtaatgtcatcgatgcatttcag
caggtctggcacgcgcccccgccggccagactgctggccgcattggagtgtgagagcacg
gaagccgccaacgaccgcactgccgggctccacaagtga
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