Lichenihabitans sp. PAMC28606: LGH83_11575
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Entry
LGH83_11575 CDS
T07621
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
liz03110
]
LGH83_11575 (clpB)
Chaperones and folding catalysts [BR:
liz03110
]
Heat shock proteins
HSP100
LGH83_11575 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_7
TniB
AAA_23
AAA_18
IstB_IS21
AAA_3
HTH_29
T2SSE
ABC_tran_CTD
NBD_SMAX1
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
UDL96663
LinkDB
All DBs
Position
complement(2445322..2447955)
Genome browser
AA seq
877 aa
AA seq
DB search
MNFEKFTERARGFVQSAQSLALREGHQQFTPEHVLKVLLDDQEGLAAGLIDKAGGRSREA
LTQTELALGKLPKVQGSGAGQVYLGQTTARVFDQAEKIAQKAGDSFVTVERLLLALAMEK
GTDASRILESVGVSPQTLNAAIEDLRKGRTADSASAESSYDALKKYARDLTEAARAGKLD
PVIGRDEEIRRSIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLHDKKLL
SLDMGSLIAGAKYRGEFEERLKAVLNEVTAANGGIILFIDEMHTLVGAGKADGAMDASNL
LKPALARGELHCIGATTLEEFRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKEKYE
LHHGVRINDSAIVAAATLSNRYIADRFLPDKAIDLVDEAASRLRMQVDSKPEALDELDRR
IIQLKIEQEALKKETDQASVDRLLKLSSELDDLQERSDALTVRWRAEKDKLGSATKIKEQ
LEAARNDLVQAQRRGEYQRAGELTYGVIPDLEKRLADNEGAAQGRLVDEAVTADHVAQVV
SRWTGVPVDKMLQGEKDKLLKMEQAIGKRVVGQPEAVRSVATAVRRARAGLQDPNRPIGS
FMFLGPTGVGKTELTKALASFLFDDESAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGG
ALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVLIIMTSNL
GSEYLSLQKDGEDTAEVREQVMGVVRGHFRPEFLNRVDEIILFHRLRRDDMGAIVDIQLL
RLAKLLEDRKITLDIDPRARAFLAEKGYDPAYGARPLKRVIQKVVQDPLAEMILSGQVGD
GETVPITAGRSGLLFGDQADEPELEGAGAEPLSRAIN
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgaaaaatttaccgagcgggcgcgcggcttcgtccagtcggcccaatccctg
gccctgcgtgaaggtcaccagcaattcactcccgaacatgtgctgaaggtcctgctcgac
gaccaggaaggcttggcggcgggcctcatcgacaaggcgggcgggcgctcgcgtgaggcc
ctgactcagaccgaactcgcgctcggaaagctcccgaaggtgcagggctcgggcgccgga
caggtctacctcggccagacgacggcgcgggttttcgatcaagccgagaagatcgcccag
aaagccggcgatagcttcgtcacggtcgagcggctgctgctcgcgctcgccatggagaag
ggcaccgatgcctcccgcattctcgaaagcgtgggcgtttcaccccagaccctcaatgcc
gcgatcgaggatctccgcaagggccgcacggccgatagcgcctcggccgagagcagctac
gacgcgctcaagaaatatgcgcgcgacctgaccgaagcggcgcgggccggcaagctcgac
cctgtgatcggccgcgacgaggaaatccgccgctcgatccaagtcttgtcgcgccgtacc
aagaacaacccggtgctgattggcgagccgggcgtcggcaagaccgcgatcgtcgaaggt
ttggcgctccgcatcgtcaacggcgacgtgcccgaaagtctgcacgacaagaagcttcta
tcgctcgacatggggtcgctgatcgccggcgcgaaatatcgcggtgagttcgaggagcgg
ttgaaggccgttctgaacgaagtgacggcggccaatggtggcatcatcctgttcatcgac
gagatgcacacgctggtcggggccggcaaggcggatggcgcgatggatgcgtccaacctg
ctgaaacccgctttggcccgcggcgaactccattgcatcggggcaaccacgctcgaggaa
ttccgcaaacacgtcgagaaggacgcggctttggcgcgccggtttcagccggtcttcgtc
agcgagccgacggtcgaggacacgatctcgatcctgcgcggtctcaaggagaaatacgaa
ctgcatcacggcgtgcggatcaacgacagtgccatcgtggcggccgcgaccctgtcgaac
cgctacatcgcggatcggtttctgcccgacaaagcgatcgatctcgtcgacgaggcggct
tcgcgcctgcggatgcaggtcgatagcaaacccgaggcattggacgaactcgatcggcgc
atcatccagctcaagatcgagcaggaagcgctcaagaaagagaccgatcaggcttcggtc
gatcgcctgctgaagctgtcgtccgagctcgatgatctgcaggagcgatccgacgccctc
acggtccggtggcgggccgagaaggataagctcgggagcgccaccaagatcaaggagcag
ctcgaagccgcgcgcaacgatctcgttcaggcgcaacgccgcggcgaatatcagcgcgcc
ggggagctcacctatggcgtgatcccggatctcgagaaaaggctggccgacaacgaaggc
gcggcgcaggggcggctggtcgacgaggccgtgacggccgaccatgtggcgcaggtggtg
tcgcgctggactggcgtgccggtcgacaagatgctgcagggcgagaaggacaagctgctg
aagatggaacaggccatcggcaagcgggtcgtcggtcagcccgaggctgtgcgatcggtc
gcgacggcggtgcgtcgggcgcgcgccgggctgcaggacccgaaccggccgatcggctcg
ttcatgtttctcggcccgaccggcgtcggcaagaccgaactcaccaaggcgctcgcgagc
ttcctgttcgacgacgagagcgcgatggtccgcatcgacatgtccgaatatatggagaaa
cattcggtctcgcggctgatcggggcgcctccgggctatgtcggctacgaggagggcggc
gcgctgaccgaggcggtgcggcggcggccctaccaggtcgtgctgttcgacgaaatcgaa
aaggcgcatccggacgtgttcaacgtgctgctgcaggtgctcgacgacgggcgcctgacc
gacgggcagggccggaccgtggatttccgcaacgtcctcatcatcatgacctcgaatctc
gggtccgaatatctgtccttgcagaaggatggcgaagatacggccgaggtgcgcgagcag
gtgatgggcgtggtgcgcgggcatttccggcccgagttcctgaaccgggtcgacgagatc
atcctgttccaccgcctgcggcgggacgatatgggcgcgatcgtcgacatccagctgttg
cgtctcgccaagctgctggaggatcgcaagatcacgctcgacatcgatccgcgcgcccgc
gcctttttggccgagaagggctacgacccagcctatggcgcgcggccgttgaagcgggtg
atccagaaagtggtgcaggatccgctggccgagatgatcctctcggggcaggtcggcgat
ggcgagaccgtgccgatcacggcgggccggtcgggtctgctgttcggcgatcaggcggac
gagcccgaactcgagggtgccggtgcagagccgctgagccgggctatcaactga
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