Lichenihabitans sp. PAMC28606: LGH83_11735
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Entry
LGH83_11735 CDS
T07621
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
liz03009
]
LGH83_11735
Enzymes [BR:
liz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LGH83_11735
Ribosome biogenesis [BR:
liz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LGH83_11735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UDL96668
LinkDB
All DBs
Position
complement(2483723..2484454)
Genome browser
AA seq
243 aa
AA seq
DB search
MRVDRMLSNLGYGSRREVKGMVWASRVVLDGIALDDAEQRIAVTPDLTARMTVDGAPLDP
PQGLVLLLNKPLGVTCSHKEAGPVVYSLLPTRWRGRDPAISSIGRLDKETSGLLLMTDDG
DLLHRVISPKAHIAKRYRATLARPLRGDEAAIFAAGTLMLEGETKPLRPALLDPLDGTTV
ALTITEGRYHQVRRMFAAVGNHVNKLHRERIGALGLPDDLAPGAYRVLDAAAIDAVFAPP
ERV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgaccggatgctctccaatctcggctatggctcgcgccgcgaggtgaaaggc
atggtttgggccagtcgcgtcgtgttggacggcatcgcgctggacgatgctgagcagcgg
atcgcggtgacgcccgatctcaccgcccgcatgaccgtcgatggtgcgccgctcgaccca
ccacagggtctggtgctgctgctgaacaagccgctcggcgtcacctgttcgcataaggag
gcgggaccggtcgtctatagcctgctgccgacccgctggcgggggcgcgatccggccata
tccagcatcggccggctcgacaaggaaacatcgggcctgctgctgatgaccgacgatggc
gatcttctgcatcgggtgatttcgcccaaggcccatatcgccaagcgctatcgggcgacg
ctggcgcgaccgctgcgcggcgacgaggccgcgatcttcgcggccggcaccctgatgctc
gagggcgaaaccaagccattgcggccggcgctgctcgacccgcttgatggcacgaccgtg
gccctgaccatcacggaggggcgctatcatcaggtccgccgcatgttcgcggcggtcggc
aatcacgtcaacaagctccatcgcgagcgcattggcgcgctcggcctgccggacgatctc
gcgccgggggcttatcgggtgctggatgcggccgcgatcgacgcggtgttcgcaccaccc
gaacgagtttag
DBGET
integrated database retrieval system
