Lichenihabitans sp. PAMC28606: LGH83_12580
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Entry
LGH83_12580 CDS
T07621
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz02010
ABC transporters
liz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LGH83_12580
03070 Bacterial secretion system
LGH83_12580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
liz02000
]
LGH83_12580
02044 Secretion system [BR:
liz02044
]
LGH83_12580
Transporters [BR:
liz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LGH83_12580
Secretion system [BR:
liz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LGH83_12580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
ABC_ATPase
AAA_22
AAA_18
APS_kinase
Zeta_toxin
MoeA_C
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UDL93421
LinkDB
All DBs
Position
complement(2659193..2661430)
Genome browser
AA seq
745 aa
AA seq
DB search
MTDQIPNALVVQEDSTHSGLRSLILIAAHFGLTLSLKQMIRDHMLSGSEVSTPELVTCAQ
DVGLKATALTLTFSGLMQLGNALPVVLRLRGGGSMVLSEVGDEAGRAWVKLRDPMSATPI
DMVVDRSQLDEMWGGEVILFKRDHEIEDKAKPFDIGMIVNLVFRERRTVRDVAICAVAMS
ILALAPIVFWREMIDRVLYHHSMNTFVVICTLMGILIAFDIIFAAIRRSLILHLTTRIDT
QLSTYMFDKVLSLPVDYFERTQVGSIAHDMNEIGKIRNFLVGQMFGTVLDMFVLFVFLPV
MAFYSPVLTIVVATFCVLIFTSIGLMVPTLRARSAVVIEAESARHSFMIQTLQGIRTVKS
LALDNRQRKMWDVLVARGARARLAEGATSNLIQTVVAPLEKLLVSGTYALGVYLAIETND
PVYTGALFAFLLLSQRVAAPLVQAGQLINQLDEARAAVQIVGNLVNQAPEEGRTGHGVKN
TLHGHLEFAKVRFSYKGSTSPALNDVTFEIAQGTTLGVMGRSGSGKTTITRLLQRLHSDY
SGLIKLDGIDVREYDVDHLRGSLGVVLQENFLFTGSIRDNIMIGKPDATFDEVVVAARLG
GAEEFIDKLPQGYDTHIYEGSPNLSGGQRQRIAIARALITNPRVLILDEATSALDAESEA
IVNANIERIAAGRTMIIISHRLASLVRADAILVLDRGSVHDIGKHEELLDRCDIYASLWN
QQNHSTPPRAPARPTLAYRGPGVAQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccagatcccgaatgccctcgtggtccaagaggattcgacccacagcggcctt
cgttcgctgatcctgatcgcggctcatttcgggctgacgctttcgctcaagcagatgatt
cgcgaccacatgctgtccggcagcgaggtgtcgacgcccgaactggtcacgtgcgcgcaa
gacgtcggcctcaaggccactgcgctgaccctcacgttctccggactgatgcagctcgga
aacgcacttccggtcgtcctgcgcctgcgcggcggcggctcgatggttctgtcggaggtc
ggagacgaggccggtcgggcctgggtcaagttgcgggatccgatgtccgcgaccccgatc
gacatggtggtcgaccgcagccagttggatgagatgtggggcggagaggtcatcctcttc
aagcgcgatcacgagatcgaggataaggccaagccgttcgacatcgggatgatcgtcaat
ctcgtcttccgcgagcgccggacggtgcgcgacgtcgcgatctgcgcggtcgccatgagt
attctggcgctcgccccgatcgtgttttggcgcgagatgatcgatcgcgttttatatcat
cacagcatgaataccttcgtggtgatctgcacgctcatgggtattctgattgccttcgac
atcatcttcgcggcgatccggcggtcgttgattctccatctgacgacgcggatcgacaca
cagttgtcgacctacatgttcgacaaggtgctgagcctcccggtcgactatttcgagcgc
acgcaggtcggaagtatcgcgcatgacatgaacgagatcggcaagatccggaatttcctg
gtcggacagatgttcggcaccgtgctcgatatgttcgtcttgttcgtcttcctcccggtg
atggctttctacagtccggttctgacgatcgtggtcgcgaccttctgcgtgctgattttc
acgtcgatcggactgatggttccgacactccgggcccgcagcgccgtcgtgatcgaagcc
gaaagcgcgcgccattcgttcatgatccaaaccttgcaggggatccggaccgtcaaatcg
ctcgcgctcgacaaccggcagcgcaagatgtgggacgtgctggtggcgcgcggcgcccgg
gctcgcttggccgagggggccacctcaaacctcattcagaccgtggtggcaccgctcgaa
aagctgctggtgagcggcacctacgcgctcggcgtgtatctggcgatcgagaccaacgat
ccggtctatacgggcgcgcttttcgcgttcctgctgctcagccagcgggttgccgcgccg
ctcgtgcaggcgggccaattgatcaaccagctcgacgaggcgcgcgccgcggtccagatc
gtcggaaacctcgtcaatcaggcgcctgaggaaggtcgcaccgggcacggggtcaagaac
acgctgcacggccatctcgaatttgcgaaagtccgtttctcctacaagggatcgacctcg
ccggcgctgaacgacgtgaccttcgaaatcgcgcaaggcacgacgcttggcgtcatgggt
cgcagcggctccggcaagacgacgatcacgcggctcctgcaacgccttcattccgattat
tccgggctgatcaaactcgatgggatcgatgtccgtgaatatgacgtcgaccatctccgc
ggcagtctcggtgtcgtgctgcaagagaatttcctgttcaccgggtcgatccgcgacaac
atcatgatcggcaagcccgacgcgaccttcgacgaggtcgtcgtggcggcccggctcggc
ggggccgaagagttcatcgacaagctgcctcagggctacgacacgcatatctacgaaggc
tcccccaacctgtcgggggggcagcgccagcgtatcgccatcgcgcgcgcgctcatcacc
aatccgcgcgttctgatcctcgatgaagccaccagtgcgctcgacgccgaaagcgaggcg
atcgtcaacgccaacatcgagcggatcgccgctggtcgcacgatgatcatcatctcgcac
cgcttggcctcgctggttcgcgccgacgctatcctggtgctcgatcgcgggtcggtgcac
gacatcggcaaacacgaggaattgctcgatcggtgcgacatctacgcgagcctctggaac
cagcagaaccattccacacccccccgggcgcccgctcgtcccacattggcttatcgaggt
cccggtgtcgcgcagtaa
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