Lichenihabitans sp. PAMC28606: LGH83_12605
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Entry
LGH83_12605 CDS
T07621
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00521
Streptomycin biosynthesis
liz00523
Polyketide sugar unit biosynthesis
liz00541
Biosynthesis of various nucleotide sugars
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
liz01250
Biosynthesis of nucleotide sugars
Module
liz_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LGH83_12605 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LGH83_12605 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LGH83_12605 (rfbC)
Enzymes [BR:
liz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LGH83_12605 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UDL93426
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All DBs
Position
complement(2666683..2667264)
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AA seq
193 aa
AA seq
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MIVEKLDIPDVVRIRPRRFGDPRGYFSETFSARMFREQVAALDFVQDNEALSGAVGTLRG
LHFQRPPTAQGKLIRAIRGAIFDVAVDIRQGSPTFGRHVWARLDGVDGDQLWVPPGFAHG
YCTLEPDTLVAYKVTNPYSPADDGGILWNDPALGIAWPLGAGGAVLSDKDTKLPVLADLP
AVFTYEANSMSTR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgagaaacttgatattcctgatgtggttcggattcgcccgcgtcgctttggc
gacccccgtggctatttctccgagaccttcagtgcccggatgttccgggagcaggttgcg
gctctcgatttcgtgcaggacaacgaggccctgtccggagcggttgggacgttgcgtggc
ctgcacttccaacggcctccgaccgcgcaaggcaagctgatccgcgccataagaggcgcg
atcttcgacgttgcggttgatatccggcaggggtcgccgacattcggccgccatgtctgg
gcgcgtctcgacggcgtcgatggcgatcaactctgggtgccgcccggttttgcccatggc
tattgcacgctcgagccggacacgttggtggcctataaggtaaccaacccctacagcccc
gccgacgatggcggcatcctgtggaacgacccggccctcggcatcgcgtggccgctcggc
gccggcggcgccgtcctgtccgacaaggacaccaagctgcccgttctcgccgacctgccc
gccgtcttcacctatgaggccaactcaatgagcacccgatga
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