Lichenihabitans sp. PAMC28606: LGH83_13165
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Entry
LGH83_13165 CDS
T07621
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00260
Glycine, serine and threonine metabolism
liz00400
Phenylalanine, tyrosine and tryptophan biosynthesis
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
liz01230
Biosynthesis of amino acids
Module
liz_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LGH83_13165 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
LGH83_13165 (trpB)
Enzymes [BR:
liz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
LGH83_13165 (trpB)
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
UDL93532
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Position
2792955..2794172
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AA seq
405 aa
AA seq
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MNAQGMPNSFRNGPDEHGRFGVFGGRFVAETLMPFILELEGAYARFKDDPGFKAETADLH
THYVGRPSPLYFAERLTDYCGGAKIYFKREDLNHTGAHKINNVIGQILLARRMGKTRIIA
ETGAGQHGVATATVCARFGLECIVYMGAVDVERQKPNVFRMKMLGAEVRAVQSGAKTLKD
AMNEALRDWVTNVDDTFYCIGTAAGPAPYPAMVRDFQSVIGTEVREQMQKQEGRLPDSLI
ACIGGGSNAIGLFHPFLDDAAVEIFGVEAAGHGLDTPAHAASMAGGKPGVLHGNRTYLLM
DDDGQILEGHSISAGLDYPGVGPEHSWLKDIGRVVYLSATDKQALDAFQLCSKLEGIIPA
LEPAHAIASILDLAPKRPKDHLMVLNMSGRGDKDIFTVADHLGGM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcaagggatgccgaactccttcaggaacggcccggatgagcatggccggttc
ggagtgttcggcggccgcttcgtggccgagaccctgatgcccttcatcctcgaactcgag
ggcgcctatgctcggttcaaggacgatcccggcttcaaggccgaaaccgccgatctccac
acgcattatgtgggtcgtccgtcgcctctgtatttcgccgagcgcctcaccgactattgc
ggcggcgcgaagatctatttcaagcgcgaggacctgaaccacaccggcgctcacaagatc
aacaatgtgatcgggcagattttgctggcccggcgcatgggcaagacccggatcatcgcc
gagacgggcgccggtcagcatggcgttgcgaccgcgacggtctgcgcccgcttcggactc
gaatgtatcgtctatatgggcgccgtggacgttgagcggcagaagcccaacgttttccgc
atgaaaatgctaggcgccgaagttcgcgccgtgcaatcgggtgcgaaaaccctcaaggac
gcgatgaacgaggccctgcgcgactgggtcaccaatgtcgacgataccttctattgcatc
ggaacggccgctggcccggcgccttatcccgccatggtgcgcgactttcaatctgtcatc
ggcaccgaggtgcgcgagcagatgcaaaagcaggagggtcgactgccggactcgttgatc
gcctgtatcggcgggggctccaacgcgatcggcctgttccatcccttcctcgacgatgca
gccgtcgagatcttcggtgtcgaagctgccggtcatgggcttgatacgccggcccacgcg
gcctcgatggctggtgggaaacccggcgtgctgcacggcaaccgcacctacctgctgatg
gacgacgatggccagatcctcgagggccattccatttcggccggcctcgactatcccggc
gtcggcccagagcattcatggttgaaggatatcggccgggtcgtctatctctcggcgacc
gacaagcaggcgctcgacgcgttccaactctgttccaagctcgagggcatcattcccgct
ctggagccggcccatgcgatcgcctcgatcctcgatctcgcgccaaaacggccgaaggat
cacctgatggtgctgaacatgagtggccgcggcgacaaggacattttcacggtcgccgac
cacctcggcgggatgtga
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