Lichenihabitans sp. PAMC28606: LGH83_13690
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Entry
LGH83_13690 CDS
T07621
Name
(GenBank) MFS transporter
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
liz03009
]
LGH83_13690
Enzymes [BR:
liz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LGH83_13690
Ribosome biogenesis [BR:
liz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LGH83_13690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_31
FtsJ
MTS
RsmF-B_ferredox
Methyltransf_11
adh_short
PCMT
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
UDL93616
LinkDB
All DBs
Position
2906769..2908181
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AA seq
470 aa
AA seq
DB search
MNKPTGPQNITGDRAKPRSGSRAGSWAKPAAAPVEHPPGLPARLIAAAILADVIGAGHGF
DEAFGSETTQAKLNALEPRDRALVRSIVVVSLRRLGTIRKALAAFLERGLPKRSGNLEWF
LVVTAAQIMFLDVPDHAAVNLCVLAVRTDPKSQPFAALANAVARNLARAPEGPADLDPFA
DTPAWLAARWKQTYGDAKAIAIALAHRIEPSLDITVKADVARWAEALEATRLPNGSLRLT
SHVPVPDLAGYADGEWWVQDAAASLPARLLRVEAGQRVADLCAAPGGKTAQLIAAGGHVV
AVDRSAERLKRLAVNLERLGMSAETEVADVAGFSADPFDAILLDAPCSATGTIRRHPDVA
WTKRASDIVSLAALQTRMIDRALGLLKPGGTLVYCVCSLEPEEGEAQIASLLRRNPDVAR
VPITADEVGGWSDCVTPAGDLRTLPFFSVLDEPPLVGLDGFFAARLVRKA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccgacgggtccgcagaacatcaccggcgaccgggccaagccgcggtctgga
tctcgagccgggtcctgggcgaagccggccgccgcgcctgtcgagcacccacccggtttg
ccggcccgcctgatcgccgccgcgattctggccgacgtgatcggcgccggacatgggttc
gacgaggcctttggcagcgagaccacgcaggccaaactcaacgcgttggaaccgcgcgac
cgcgccctggtgcgctcgatcgtggtcgtgtcgctgcgtcgcctcggcaccatccgcaag
gcgctcgcggcctttctcgagcgcgggctgcccaagcggagcggcaacctcgagtggttt
ctcgtggtgacggcggcgcaaatcatgttcctcgacgtgccagatcacgcggccgtcaat
ctctgcgtcctcgcggtgcggaccgacccgaaaagtcagcccttcgcggcgctcgccaat
gcggtggcccgtaatctcgcccgggcgcccgaaggccccgccgacctcgacccgtttgcc
gatacgcccgcttggctggccgcgcgttggaagcagacctatggagatgcgaaagccatc
gcgatcgcgctggcgcaccgcatcgagccttcgctcgacatcaccgtcaaggccgatgtc
gcgcgctgggccgaagcgctcgaggcgacgcgcttgccgaacggctcccttcgcctcacc
agccatgtgccggtcccagacctcgccggctacgccgatggggaatggtgggtgcaggat
gcggccgcctcgctgccggcgcggttgctgcgcgtcgaggcggggcagcgggtcgccgat
ctctgtgccgcgccgggtggcaagaccgcgcaattgatcgcggcaggcggccatgtggtg
gctgtcgatcgctcggccgagcggctcaagcgcctcgccgtcaacctcgaacggctgggc
atgagcgccgagacggaagtcgccgacgtcgcgggtttttccgccgaccccttcgacgcg
atcctgctcgatgcgccgtgttcggcgaccggaacgatccgccgtcaccccgatgtggcc
tggaccaagcgcgcctcggatatcgtgtcgctggcggccctgcagacccgcatgatcgat
cgggcgctcggattgctgaagcccggcggcacactcgtctattgtgtctgttcgttggag
cctgaggagggtgaagcgcagatcgccagcttgttgcggcgcaacccggatgtggcgcgc
gtgcccatcacggccgatgaggtcggcggttggtccgattgcgtgacgccggccggcgac
ctccgcacgctgccgtttttttcggtgctcgacgaaccgccgctcgtggggctcgatggg
ttcttcgcggctcgcctcgtccgcaaagcctga
DBGET
integrated database retrieval system
