Lichenihabitans sp. PAMC28606: LGH83_15060
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Entry
LGH83_15060 CDS
T07621
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LGH83_15060 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
liz02000
]
LGH83_15060 (rhaS)
Transporters [BR:
liz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
LGH83_15060 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
UDL93867
LinkDB
All DBs
Position
3198920..3199912
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AA seq
330 aa
AA seq
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MSSFRTVALASALIAGLMASTAHAADVKIALVVKSLGNGFFDAAHKGAEQAAKELGGVQI
VYTGPTTTTAEGQIEVINSLISQKVDAIAVSANDKDAVVPVLKRAMQRGIKVISWDSAVA
PEGRMLHLNPSSNALIGNMCLKLAADTLPGGKGDVAILSATVTSTNQNTWIEEMKKALPK
YPGLNLVTTVYGDDLSDKSYRETQGLLQKFPNVKVIIAPTSVGIVAAAQAVKDAGKINQV
YVTGLGLPSEMAGAVHAGATKSFAIWNPIDLGYSATELAFDLVKGAKAEPGAELPMGRMG
KLKLDAGNEGAMADPFVYDKTNVDEFAKIF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcattcaggacagtcgccttggcatcggcgttgatcgccgggctgatggctagc
acggcgcatgccgccgacgtcaagatcgccttggtggtcaaatcgctcggcaacggcttc
ttcgatgccgcccacaagggcgcggagcaggccgccaaggagctcggcggcgttcagatc
gtctatacggggccgacgacgaccaccgccgaaggccagatcgaggtcatcaattcgctg
atctcccagaaggtcgacgccatcgcggtctcggccaatgacaaggatgcggtcgtgccg
gtgctgaaacgcgctatgcagcgcggcatcaaggtcatctcgtgggactcggccgtcgcg
cctgaggggcggatgctgcaccttaatccgtcgtcgaacgcgctcatcggcaatatgtgc
ttgaaactggcggccgatacgctgcccggcggcaagggcgatgtcgcgatcctgtcggcg
accgtcacgtcgaccaaccagaacacctggatcgaggagatgaagaaggcgctgccgaaa
tatccgggcctcaacctcgtcaccacggtctatggcgacgatctatccgacaagagctat
cgcgagacccaggggcttttgcagaagttcccgaacgtcaaggtcattatcgcgccgacc
tcggtcggcatcgtggcggccgcgcaggccgtgaaggatgcgggcaagatcaatcaggtc
tacgtgaccgggctcggtcttccgtccgaaatggcgggtgccgtccacgcgggcgccacc
aagagctttgcgatctggaacccgatcgacctcggctattcggcgaccgaactcgccttt
gatctcgtcaagggcgccaaggccgagccgggcgcagaactgccgatgggccgcatgggc
aagctgaagctcgacgcgggcaacgaaggcgcgatggccgaccccttcgtctacgacaaa
accaacgtcgacgagttcgccaagatcttctga
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