Lichenihabitans sp. PAMC28606: LGH83_15095
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Entry
LGH83_15095 CDS
T07621
Name
(GenBank) AAA family ATPase
KO
K08482
circadian clock protein KaiC
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
LGH83_15095
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
IstB_IS21
DnaB_C
AAA_22
RecA
AAA_16
nSTAND3
PAXNEB
AAA
AAA_18
Rad51
MEDS
NPHP3_N
AAA_14
AAA_19
GvpD_P-loop
SLFN-g3_helicase
AAA_11
AAA_7
AAA_30
NACHT
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UDL93873
LinkDB
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Position
complement(3207378..3208871)
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AA seq
497 aa
AA seq
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MIAKSKARVSTGVSGLDNILGGGLTPDRLYLVEGTPGTGKTTLALQFLMEGIRQGESGLY
ITLSETEEELRAGAATHGWTLDGVTVSELVTEDGLDPNQEQSILHSSEIELGETTGRLID
LVTTLEPRRIVFDSLSEFRLLAQNPLRYRRQILALKQFFANRKCIVILLDDRTLEPTDLQ
LHSIAHGVIRLEQHAQEYGSERRRLQIIKMRGTKFRGGFHDLNIETGGIVVFPRLIASEH
HADFVAAPLGTGSSQLDALLGGGLLPGTNALFSGPSGVGKTSTAVSCMMAAIRSGKQGVY
YLFDEGRATLLERAAHLGMDLGTAIEAGKVDLRQIDPAELSPGEFANHVRRAVEEDGANF
VVIDSLNAYLHAMPGQKFLLLQMHELLTYLNQLGVVTILILGQHGIVGDVRSDVDLSYLS
DTIMLFRFFEAQGEVRKAVAVVKSRAAKHERTIREFRLTSTGLEVGKALRDFEGVLSGLP
SYRGEQPMLGQEPSVEA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaaagtccaaggctcgagtctcgaccggtgtttccgggctcgacaacatcctc
ggcggcgggttgacgccggatcggctctatctcgttgaagggacacccggcaccggcaag
acgacgttggcgcttcagtttctcatggaaggtatccgacagggggagtcaggcctttac
atcaccctgtctgaaaccgaggaggaattgcgggctggagccgccacgcatggatggact
ctcgacggcgtcacggtctctgaactcgtcacggaggatggcctcgatcccaaccaggag
caatcgatcctgcattcgtcggagattgagcttggggagacgacgggacggctgatcgat
ctcgtcaccacgttagagccgcgtcgcatcgtcttcgatagcctctccgagttccgcctt
ctggcgcaaaatccattgcgatatcgacgccaaatcttggccctcaaacaattcttcgcc
aaccgtaagtgtatcgttatcctgcttgacgaccggacattggaaccgacggacctacag
ctgcacagcatcgctcatggcgttatccggctcgagcaacacgctcaggaatatggcagc
gagcggcgccgtctgcagatcatcaagatgcgcggcacaaaatttcgtggcggcttccac
gatctcaacatcgagacaggcggcatcgtagtctttccgcgtctgattgcgtcggaacat
catgcggattttgtcgccgctccgctcggaaccgggtcgagccagctcgatgcattgctg
ggcggcggcttgctgcccggcaccaacgcgctgttcagtggtccctcgggtgtcggcaag
acctcgacggccgtgagttgcatgatggcggcgatccgcagcggcaaacagggggtctac
tacctttttgacgagggacgggcgaccctgctggaacgtgccgcccacctcggtatggat
cttggcaccgcgatcgaagccggcaaggtagacctgcgtcagatcgatccggccgagttg
tcgccgggcgaattcgccaatcacgtgaggcgcgcggtcgaggaggatggtgccaacttc
gtcgtgatcgacagcctcaatgcctacctgcacgcgatgccgggtcagaaattcctgctg
ctgcaaatgcatgagttgctgacctacctaaatcagctgggcgtcgtcacgatcttgatc
ctcggccagcatggtatcgtgggcgacgtccgaagcgacgtggatctcagctatctcagc
gatacgatcatgctgttccgctttttcgaagcgcagggcgaggttcgcaaggcggtggcc
gtggtcaagagccgggccgccaagcatgagcgaaccatccgcgagttcaggctcacgtcg
accgggctcgaggtcggcaaagccttgcgggacttcgaaggcgtgctgtccggcctgccg
agctatcgcggcgagcagccgatgctggggcaagaaccaagcgtcgaggcctga
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