Lichenihabitans sp. PAMC28606: LGH83_15315
Help
Entry
LGH83_15315 CDS
T07621
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGH83_15315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
liz02000
]
LGH83_15315
Transporters [BR:
liz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LGH83_15315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
UDL93911
LinkDB
All DBs
Position
3246594..3247826
Genome browser
AA seq
410 aa
AA seq
DB search
MPLRDRSRPRLAAPRSSGKAARPHLRVLGTEITLIEPLRRMAEDELGISLSFESLDFLSA
QRKAALEPDSYDIYDQCFHNLDIVWFWRAIQPIDLGRIERWSEVSDLTKRGRISPLASLG
RGENPNKVLYVQPDLSLGERPSSRISMLPTVHNLDAFAYLPHLFPDRRADEASWGWLFDP
EIRGRLALVDEPGIGVFDAAMAFESRGDIRFGDMGNMTIDEIDGLMGLLWARKKEGFFAG
LWRTAAQSASDMMSGQAGIGSMWSPGIAAVQQAGRTLAEAVPREGYRAWHAGLCLSSRLD
GDLLDSAYAYLNWWLDGKPGALLARQGFYMSVPGRVRAAMPAAEWAYWYAGQPAPASLPD
VEGRPMIPKGAVRPGGPYWQRAEHIAVWNTTMDEYNYLARRWSNFADGFT
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcgcgatcggtcgcgtccccgtcttgccgcgccgcgatcgtctggaaaggcc
gcgcggccgcatcttcgtgtgctcgggacagagatcaccctgatcgagccgctgcgccgg
atggccgaagacgaactcggcatctcgctctccttcgaaagccttgattttctctcggcg
cagcggaaggcggcgctcgagcctgacagctatgacatctacgatcagtgtttccacaat
ctcgatatcgtctggttttggcgcgcgatccagccgatcgacctcggtcgcatcgagcgg
tggagcgaggtcagcgatctgacgaaacgcggcaggatcagcccgctcgcctcgctcggt
cgtggggagaaccccaataaggttctctatgtccaacccgatctgtcgctcggcgaacgg
ccatcctcgcgcatctccatgctgccgaccgtccataatctcgatgcctttgcctacctg
ccgcatctgtttcccgaccgacgggccgatgaggcaagctggggctggttgtttgatccg
gagatccggggccgtctcgctctggtggacgagccggggatcggcgtcttcgatgccgcg
atggcgttcgagtcgcgcggcgacatccgctttggcgatatgggcaatatgacgatcgac
gagatcgacgggcttatgggcctgctctgggcgcgcaagaaggagggcttttttgcgggc
ctctggcggaccgcggcccagtccgcgagcgatatgatgtccggacaggccgggatcggc
agtatgtggtcgcccggcatcgccgccgtgcagcaggccggccgcaccctggccgaagcc
gtaccgcgcgagggatatcgcgcgtggcacgccggcctttgcctgtcgtcacgcctcgat
ggcgatcttctcgacagcgcctatgcctatctgaactggtggctcgatggaaagccgggc
gctcttctggcgcggcagggcttctacatgtcggttccgggccgcgtccgcgccgcgatg
ccggcggccgaatgggcctattggtacgcgggccagccggcgcccgcctcgctcccggac
gtcgagggacgcccgatgatcccaaaaggcgcggtgcgccctggcggtccctattggcaa
cgggccgagcatatcgccgtgtggaacacgacgatggacgaatataattacctggcgcgg
cgctggtcgaattttgccgatgggttcacataa
DBGET
integrated database retrieval system
