Lichenihabitans sp. PAMC28606: LGH83_16090
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Entry
LGH83_16090 CDS
T07621
Symbol
kaiC
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
LGH83_16090 (kaiC)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
RecA
AAA_22
AAA_16
SLFN-g3_helicase
AAA_30
NACHT
PAXNEB
AAA_14
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UDL94052
LinkDB
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Position
complement(3416973..3418736)
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AA seq
587 aa
AA seq
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MSASDHGAAEARGRANSKVATGIVGFDEISGGGLPKNRLTAVVGSAGAGKTVFALQTLKN
RLADRGEPCIFVTFEEPIDRIRSNVASFDWDVDTLESDRFHFIDARIPDDAVVTGAFDLA
GLLAGLSALLVETGARNVVFDGIDMLLSSLKDERLERQELLRLDSWIKRSEISAIVTVKI
FGAGDRDQIRADFLQYMTDCLVIMAEIVTATGSSRTIRIAKFRGSGFSGNPVPVVMGASG
IDVIAFKDVRVGYPTYTGRVSSGVPRLDALLNGGYLRGSSTLISGSPGTSKTSLGVTFAF
AACERGEHAVVISFDESGAQIVGNMLSIGMNLTPHIESGLLTIVSFLSTGRSPEEHFVAI
RNVLETHHPKCLVIDPISALLKSDYPFSAMICESLLDLAKSQEISVVCSSLLDQVSGTTE
LSASQISTIADTWLHVSYVARDGERNRALTIVKSRGTGHSNQVRELVLGTSGIDLVDVYV
AEGEVLMGSARAQKEVAVKRLHVLQEIAAERQRLSLERQIAEARAHVEAANLELGWKQKE
VDLLIASEQSRLETSQIDANERLSLRRVDDDGPLAEGGNTNVPVNPR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatcggatcatggagccgcagaggcgcgcggaagggcgaactcgaaagtcgcg
accggtattgtcggattcgacgaaatcagcggtggcggcttaccgaagaaccggttgacg
gctgttgtcggaagtgccggcgccggcaagacggtatttgcgcttcagacgctgaaaaat
cgccttgccgaccgcggcgagccgtgcatcttcgtcaccttcgaggagccgatcgatcgc
atccgcagcaacgtcgcctctttcgattgggatgtcgatacgctcgagtccgacagattc
catttcatcgacgcccgcattccagacgacgcggtcgtgacgggtgcgttcgatctcgcg
gggttgcttgccggtctcagcgcattgctcgtcgagaccggtgcgcggaacgtcgtcttc
gacggcatcgacatgctgctcagcagcctgaaggatgagcggctggagcggcaagaattg
ctgcgcctcgatagctggatcaaacggtcggagatatcagcgatcgtgaccgtgaagatc
ttcggggctggagaccgggaccagatccgcgccgactttcttcaatatatgaccgactgc
cttgtcatcatggccgagatcgtcacggcgaccggatcctcgcgcacgatccgaattgct
aagtttcgcgggtcgggtttttcgggcaatcccgttccggtcgtcatgggcgcgtctggg
atcgacgtcatcgcgttcaaggacgttcgggtcggctaccccacctatacgggccgcgtg
tcctccggagttccgcggctggacgcgctgctcaacggcggctatctgcgtgggagcagt
accctcatttcgggctcacccggaacctcgaagaccagcctcggcgtcacgttcgccttc
gccgcatgcgagcgcggtgagcatgcggtcgtgatcagctttgacgaaagcggggcacag
atcgtcggcaacatgctgtcgatcggcatgaatctgacgcctcatatcgagtccgggttg
ctgacaatcgtgtcgttcctctcgaccgggcgcagcccagaggagcatttcgtcgcgatc
cgcaacgttctggagacgcaccatccgaagtgcctcgtgatcgacccgatctccgcgctg
ttgaaatccgattatccgttctccgcgatgatctgcgagagcttgctcgatctggccaaa
tcccaagaaatttccgtcgtctgtagctcgcttctcgatcaggtgagcggcaccaccgag
ttatcggcaagtcaaatttcgacgatcgccgacacgtggctccacgtgtcctacgtggcg
cgcgacggcgaacgcaaccgtgctttgacgatcgtcaaatcgcgagggaccggacattcg
aaccaggttcgcgaattggtgctcggcacgtcggggatcgatctcgtcgatgtctatgtc
gcggaaggagaggtgctgatgggaagcgctcgcgcccaaaaggaagtcgctgtcaagcgg
ctccacgttctccaagaaatcgctgcggagcgtcagcgtctctcgctcgaacggcagatt
gcggaggcacgcgcccatgtcgaggccgcgaacctcgagctgggctggaaacaaaaggag
gtggatctgctgatcgcgtcagaacagagccgccttgaaaccagccagatcgatgcgaac
gagcgattgagcctccgtcgcgtcgacgatgacggacccctcgcagaaggtggaaacacc
aacgttcccgtcaacccgagatga
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