Lichenihabitans sp. PAMC28606: LGH83_17530
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Entry
LGH83_17530 CDS
T07621
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00330
Arginine and proline metabolism
liz00480
Glutathione metabolism
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
liz04148
Efferocytosis
Module
liz_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LGH83_17530
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LGH83_17530
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LGH83_17530
Enzymes [BR:
liz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
LGH83_17530
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DUF7588
Response_reg
Motif
Other DBs
NCBI-ProteinID:
UDL96756
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All DBs
Position
3717115..3719478
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AA seq
787 aa
AA seq
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MDFFRRFTVLICAPNFDPDDLEGVRVQQIISSVEKLGFEVVRARRVDDAAIAVQTDAAIG
CMVVDWGKRGLDGKAAALIDLMRKRGLEMPIIIMVRRKRLEDIPVEVLDFIDGYIFLAEE
TPDFIARNLVSRLKQYAETLKTPFFGALVDYAEEGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAVFRDDLDNSVLDLGDLLVHEGPALQAQKEAAVIFGAEKTYFVLNGTSASNKIVL
SALVTDGDLVLFDRNNHKAAVHGALFLGGAIPVFLETDRNAFGLIGPIYHEALDEAAIRE
KIRTNPLIEDKDAWQRERPFRVAVIEQCTYDGTIYNAEMILAKIGHLCDYILFDEAWAGF
MKFHPLFAGSFAMGLKSLDETSPGIIATQSTHKQLASFSQASQIHTKDSHIRGQTRRVEH
RRFNESFLLHASTSPFYPIFASLDVGAQMMKGRSGVVLWDDTIRLGIELRKKLRAIRREF
EEKEQEPLRRWFFDPFVADKVSLPPLVDGDEPREATWESVPTDELAAGRQYWEYTPGAAW
HGFTHVAEHYAMTDPAKLTILTPGFDRTTGAYAEHGVPAPIVAQYLRENRVVAEKNDLNS
LLFLLTPGVESSKAGTLISALVAFKRLHDENVPLEEAMPEFVNRRPKRYRGLRLRDLCHD
FHAFHREAGTSAMQKAQFSPAHLPDMVMEPHEAVKQLTRNKVDYLPIDQIDGRIATTLML
VYPPGIGTLVPGERINERSKPMLDYFKMFERSANLFPGFEAEIQGLYREVAPDGAIRFYT
YVTREGL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttcgtcgtttcaccgtcctgatctgcgcgcccaatttcgatcccgacgat
ctcgagggcgtgcgggttcagcagatcatctcctcggtcgagaaactcggcttcgaagtg
gtgcgtgcgcgacgggtcgacgacgcggccattgcggtgcagaccgatgcggcgatcggc
tgcatggtcgtggattggggcaagcgcggcctcgacggcaaggccgcggcgctgatcgac
ctgatgcggaagcgcggcctcgaaatgccgatcatcatcatggtgcgccgcaagcggctc
gaggatattccggtcgaggtgctggacttcatcgacggctacatctttctcgcggaagaa
acgccggatttcatcgctcgcaatctcgtcagccgtctgaagcaatatgccgagacgctg
aagacgcccttcttcggcgcgctggtggattatgcggaggaggggaaccagctttggacc
tgtcccggccataacggcggcatcttctacaatcgtagcccgatcgggcgcatcttcgtc
gaacatctcggcgaggcggtgttccgcgacgatctcgacaattcggtgctcgatctcggt
gacctgctggtccacgaggggccggccttgcaggcccaaaaggaagcggctgtcattttc
ggcgccgaaaaaacctatttcgtgctcaacggcacctcggcctcgaacaagatcgtgctg
tcggctctcgtcacggacggcgatctcgtgctgttcgaccgcaacaaccacaaggcggcg
gtgcatggcgcgctcttcttgggcggtgccatcccggtgtttctcgaaaccgatcgcaac
gccttcggcctgatcggcccgatctatcacgaggcgctggacgaagcggccattcgcgag
aaaatccggaccaatccgctgatcgaggacaaggacgcgtggcagcgcgaacggccgttc
cgcgtcgccgtgatcgagcaatgcacctatgacggcacgatctataacgccgagatgatc
ttagccaagatcggccacctttgcgactacatcctgttcgacgaggcctgggccggcttc
atgaagttccatccgctatttgccggaagcttcgccatgggcctgaaatctctggacgaa
acctcgcctggtatcatcgcgactcaatccacgcataaacagctcgcgagcttttcgcag
gcctcgcagatccacaccaaggatagccacatccgcgggcagacccggcgcgtcgagcat
cgacgcttcaacgaaagcttcctgctgcacgcgtcgacctcgcccttctatccaatcttc
gcctcgctcgatgtcggcgcacagatgatgaagggccgctccggcgtcgtgctgtgggat
gatacgatccggctcggcatcgaattgcggaagaagctccgcgcgatccggcgcgagttc
gaggagaaggagcaagaaccgctgcgccgttggttctttgatcccttcgtggccgacaag
gtcagcctcccgcctctcgtcgacggcgacgagccgcgggaagccacttgggaaagcgtg
ccgacagacgaactcgcggcgggccggcaatattgggaatatacgccgggcgcggcctgg
cacgggttcacccatgtggccgagcattacgccatgacggacccggccaagctgaccatc
ctgacgccgggcttcgaccggacgaccggcgcctatgcggagcatggtgttccggccccg
atcgtggcgcaatatctgcgcgaaaaccgtgtggttgccgagaagaacgatttaaactct
ttgctgtttctgctgacgccgggcgtcgagtccagcaaggccggtacgttgatcagtgcc
ctcgtcgccttcaagcggctgcatgacgaaaacgtgccgctggaggaggccatgccggaa
ttcgtcaatcgacgccccaagcggtatcgcggcctccgcttgcgcgacctctgtcacgat
ttccacgccttccaccgcgaggccggcaccagcgcgatgcagaaggcgcagttttcgcca
gcccatctgcccgatatggtgatggagccgcatgaggccgtgaagcaactgacccgcaac
aaggtcgactatctgccgatcgaccagatcgacggccgcatcgccaccacgctgatgctg
gtctatccgcccggcatcggaacccttgtgccgggcgagaggatcaacgaacgctcgaag
ccgatgctggattacttcaagatgttcgagcgcagcgccaacctgttccccggcttcgag
gctgaaatccaggggctgtatcgggaagtcgccccggatggcgcgatccggttttatacc
tacgtgacgcgcgaggggctttaa
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