Lichenihabitans sp. PAMC28606: LGH83_18600
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Entry
LGH83_18600 CDS
T07621
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
liz03021
]
LGH83_18600
Transcription machinery [BR:
liz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LGH83_18600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
HTH_3
DUF3782
UCR_14kD
HTH_10
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UDL94483
LinkDB
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Position
complement(3948574..3949443)
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AA seq
289 aa
AA seq
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MLQMAGVRRQFVKAAMAAKFLERDEERALAQSWKDHGDEAALHQLASAHMRLVIALAARF
RHYGLPLADLIQEGHVGLLEAAARFEPEREVRFSTYATWWIRASIQDYILRNWSIVRGGT
SSAQKALFFNLRRLRAKLSQNPGPGGNTSMFATIALAIGVSPADVELMDTRLSGSDVSLN
APMTESDSSGPAERVDFLVDDKPLPDETVGEQIDSDRRVTWLKEALKVLTDRELRIVRER
RLAEETATLEALGARLGISKERVRQIENRAMEKLKRALTSVDNPPLQIG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagatggccggcgtgagacgtcagtttgtcaaagccgcaatggcagcgaagttc
cttgaacgggacgaagaacgggcgctcgcgcagagctggaaagaccatggcgacgaggcc
gcgctgcatcaactcgcgtccgcccatatgcgtctcgtgatcgccctggcggctcggttc
cgtcattacggccttcccttagccgatctgatccaagaaggtcatgtgggcttgctcgaa
gccgccgcgcggttcgagcctgagcgcgaggttcgtttctcgacctacgcgacgtggtgg
atccgcgcctcgatccaagactatatcctccgcaattggtcgatcgtccggggcggcaca
agttctgcccagaaggctttgttcttcaacctgcgccgtctgcgcgccaaactctctcag
aacccggggcccggcggaaacacgtcgatgttcgcgacgattgccctggcgatcggtgtg
tcgcccgcggatgtcgaactgatggacacgcggttgtccggctcggatgtctcgctcaac
gcgccgatgaccgagagtgattcctccggcccggccgagcgggttgattttctggtcgac
gacaagcctttgccggacgaaaccgtcggcgagcagatcgatagcgatcggcgcgtgaca
tggctcaaggaggccctcaaggtattgacggatcgtgagttgcggatcgttcgggagcgc
cgcctcgcggaagagaccgcgacgctcgaggcgcttggcgcccggctcggaatctcgaaa
gaacgtgtccggcaaatcgaaaatcgcgcaatggagaagctcaagcgggcattgacgagc
gtcgataatccgcccctgcagatcggctga
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