Lichenihabitans sp. PAMC28606: LGH83_18720
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Entry
LGH83_18720 CDS
T07621
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGH83_18720 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liz03400
]
LGH83_18720 (mutM)
Enzymes [BR:
liz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LGH83_18720 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LGH83_18720 (mutM)
DNA repair and recombination proteins [BR:
liz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LGH83_18720 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
UDL94506
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All DBs
Position
3971980..3972870
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AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLASAMEGEVLARVTLNRPDLRFPFPPSFIERLQGRRLIAMGRRAKYL
LAELDDGLLLAMHLGMTGSFRVRAPGAGSPDTVTSHYYHERNAESLHDHVRFDLGSGMTI
TYNDPRRFGFMTLVEAGGLDSHPLFRGIGVEPLSNAFDGVTLSRLMAGKSTPLKAALLDQ
TLIAGLGNIYVCESLHRARLSPRRMAGTLARKDGGPTARAERLSTMIRDVLNEAVEAGGS
SLRDYRHTDGALGTFQHGFRAYDREGEPCTTPSCRGMIRRIVQSGRSTFFCAECQR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtcgaaaccgtgcgtcgcggccttgccagcgcgatggaaggc
gaggtgctcgcccgtgtcaccctgaaccggccggatcttcggtttcctttcccgccatcc
ttcatcgagcgtctccagggccgccgtctgatcgcgatgggacgccgtgccaaatatctg
ctggccgaactcgacgatgggctcctgctcgccatgcatctcggcatgaccggctcgttt
cgggttcgggcgcccggagcaggcagccccgatacagtgacaagccattattaccacgag
cgcaacgccgagagcctgcacgatcatgtgcggttcgatctcggcagcggcatgacgatc
acctataacgatccgcggcgcttcggctttatgacactggttgaggcgggcggcctcgac
agtcatccgctctttcgcggcatcggggtcgagccgctgtccaacgccttcgacggcgtg
acactaagccgattgatggccggcaaaagcacgccgctgaaggcggcgctcctcgaccag
actctcatcgcggggcttggcaatatctacgtctgcgaatcgctgcaccgcgcgcggttg
tcgccgcgccgcatggccggaacgctggcccgaaaagatggtggcccgactgcgcgagcc
gagcgcctgtccacgatgatccgcgacgtgctgaacgaagcagtcgaggccggcggctca
tcattgcgggattaccgccacaccgatggggcattgggcacgttccagcacggcttccga
gcctatgaccgcgagggcgaaccctgcacgaccccgagttgtcggggtatgatccggcgg
atcgtgcagtccggccggtccaccttcttctgcgccgagtgccagcgctag
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