Lichenihabitans sp. PAMC28606: LGH83_18905
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Entry
LGH83_18905 CDS
T07621
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00260
Glycine, serine and threonine metabolism
liz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LGH83_18905
Enzymes [BR:
liz01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
LGH83_18905
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
LGH83_18905
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
HI0933_like
DAO
Pyr_redox_3
GIDA
FAD_binding_3
Thi4
AlaDh_PNT_C
Fer2_BFD
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
UDL94541
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Position
4015187..4018165
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AA seq
992 aa
AA seq
DB search
MSAPYRTPTGGRIDRRASRRFWFDGRSFDGLEGDTLASALLSHGIHFVGRSFKYHRPRGF
LAAGSEEPNALAVIDRGTGRETPNLRMTQVELYEGLEARSQNHWPSLFYDVGAINGVLAP
IFAAGFYYKTFMGPRFMRGPGVWTKLFEPAIRRAAGLGPAPTAPDPDIYAGRFAHCDVLV
VGAGPAGLAATLAAARAGKRVMLCDEGSEFGGSLLSEPHLTIDGQPAADWLLAALANLGA
MSNVTLLPRAQAFGYYGHNLVALTERLTDHLASVDRPTPRERMWQVRAKEVVLATGAIER
PLVFPGNDRPGVMLAGSARVFLNRYGVKVGHRVLVATAHDSAYRAALDLRAAGVEIAAIL
DLRQHPSGPLVAEAEAVGIRILRGATVTGTKGYWRVSEATVGHVSGEYVTDLETIACDAL
LMSGGWTPSIHLFSQSRGVVAFDEASGMFLPDKAVQAQRSVGACRGVFGIADALSDGDAT
GRPFTVLGDDQHGPGGFIGALPQTGDGARAKAFVDFQNDVTAKDIKLATREGFRSIEHIK
RYTTTGMATDQGKTSNLNALAIAAKALNEPVPAVGLTTFRQPFTPVTFGSFAGMSRGQLF
DPIRKTPIHDWAVARGARFEDVALWKRAHYFPEAGEDMHAAVARECRRTRDSAGLFDAST
LGKIEVVGPDAAEFLNRLYPNAWLKLGVGRCRYGLMLNEAGFVMDDGVVGRLSPDRFHVT
TTTGGAPRVLAHMEDYLQTEFPDLKVWLTSTTDQWAVIAVQGPRARDILAPLIEDVDLTP
AAMPHMAIREGHIGGVPMRLFRVSFTGELGFEVNVPADYGRAVWEAIWAEAKRYDAVAYG
TEAMHVLRAEKGYIIVGQETDGTATPDDVGLGGMISASKPDFVGKRSLARPFLMEAGRKQ
LVGLLTLDPTVVLDEGAQVVPVSDAPIGTHAIGNVTSSYASAVLGRSIAIAMVEGGRARL
GETIYIPMASGSIAAKVTTPVFYDPQGERLNG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccataccgcacgccgaccggaggacggatcgaccgccgtgcatcgcgccgc
ttctggttcgatggacgcagcttcgacgggttagagggcgacacgctcgcctcggccttg
ctcagccacgggatccacttcgttggccgttcgttcaaatatcaccgcccgcgcggtttt
ctcgcggctggctccgaggagccgaacgcgctcgcggtcatcgatcggggcaccggccgc
gagaccccgaaccttcgcatgacgcaggtcgagctgtacgagggtctcgaggcacgcagc
cagaaccactggccctcgctgttctatgacgtcggcgccatcaatggcgtgttggccccg
atcttcgcggcagggttctactataagaccttcatggggccgcgcttcatgcgagggccg
ggcgtctggaccaagctgttcgagcccgcgatccgccgcgccgccggtctcgggccggcc
ccgaccgcgcctgaccccgacatctatgctggccggttcgcgcattgcgacgtgttggta
gtcggcgccggaccggccggccttgcggcgacgctcgccgcggcgcgagcgggcaaacgc
gtgatgctctgcgacgaggggagcgaattcggcggctcgcttctgtccgagcctcacctc
acgatcgacgggcagcccgcggcggattggctgcttgcagcgctggccaacctcggcgcg
atgtcaaacgtgacgttgctgccccgcgcccaggcgttcggctattatggccataacctc
gtggctttgaccgagcgcctgaccgaccatctcgcctcggtcgatcgtcccaccccgcgc
gagcggatgtggcaggttcgcgccaaagaggtcgtgctcgcgaccggcgcgatcgaacgg
ccgctggtcttccccggaaacgatcgtccaggcgtgatgctggctggttcggcccgcgtg
ttcctcaaccgctacggcgtgaaggtcggccatcgcgtcttggtcgcgacggcgcatgac
agcgcttatcgggcagcgctcgatctcagggctgccggtgtcgagatcgccgcgatcctc
gatctgcgccagcacccgagcgggccgctcgtcgccgaggcggaggccgtcggcattcgc
attctgcgcggcgcgaccgtgacgggcaccaagggatattggcgcgtcagcgaggcaacc
gtcggtcacgtctccggcgagtatgtgacggacctcgagaccatcgcatgcgacgcgctg
ctcatgagtggcggctggacgccatcgatccatcttttctcgcaatcgcgtggcgtggtc
gccttcgacgaggcgagtggcatgttcctgcccgataaagccgtccaggcgcagcgctcc
gtgggggcctgccgtggcgtgttcggcatcgcggacgccttgtcggacggcgatgcgacg
ggacgccccttcacggtgctgggcgacgatcagcatggccccggcgggttcatcggggct
ttgccgcagaccggcgatggcgcgcgcgccaaggcgttcgtcgatttccagaatgacgtg
accgccaaggacatcaaactcgcgacgcgcgagggcttccgctcgatcgagcatatcaag
cgatacaccacgaccggcatggcgaccgatcagggcaaaacatcgaacctcaatgcgctg
gcgatcgccgcaaaggccctcaacgaacccgtgccggcggtcggactgacgaccttccgc
cagccgtttacgcctgtgacctttggcagtttcgcgggcatgtcgcgcggacaattgttc
gatcccatccgcaagacgccgatccatgactgggcggtggcgcgcggcgcgcggttcgag
gatgtcgcgctgtggaagcgggcccattatttccccgaggcgggtgaggacatgcatgcg
gcggtggcgcgggaatgtcgccgcacgcgggatagcgctggcctgttcgacgcctcgacg
ctcggcaagatcgaggtggttgggcccgatgcggccgagttcctcaatcggctctatccg
aatgcctggctcaagctcggtgtcggccgctgccgctatggattgatgctgaacgaagcc
gggttcgtgatggatgacggcgtcgttgggcggctgtcgccggaccgtttccacgtgacg
accacaaccgggggcgcacctcgcgtgctggcccatatggaggattatctccagaccgag
tttcccgatctcaaggtctggttgacgtccaccacagatcagtgggccgtcatcgcggtg
cagggtccccgcgcacgcgacattctcgcgccgctgatcgaggatgtggatttaacgcct
gccgccatgccgcatatggcgatccgcgagggtcacatcggtggcgtaccgatgcggctg
ttccgggtgagtttcacgggcgaactcggcttcgaggtgaatgtgccggccgattacggc
cgcgccgtctgggaggcgatctgggccgaggcgaagcgctacgacgcggtcgcctatggc
acggaggcgatgcatgtcttgcgcgccgaaaagggctacatcatcgtcgggcaggagacg
gacggcacggcgacgccggacgatgtcgggcttggcggtatgatctcggccagcaagccc
gatttcgtcggtaaacgatctctggcgcgcccgttcctgatggaggcggggcgcaagcaa
ttggtcggtctgctcacgctcgatccaaccgtggtgctggacgagggcgcccaagtggtt
cccgtatccgacgcgcccatcggcacgcatgcgatcggcaacgtcacatcatcctatgcg
agcgcggtgttgggccgatccatcgcgatcgcgatggtcgagggcggccgcgcgcggctt
ggcgagacgatctatattccaatggcgagtggttcgatcgcggccaaagtcacgacgccg
gtcttctacgatccgcaaggagaacgcctgaatggttga
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