Lichenihabitans sp. PAMC28606: LGH83_18985
Help
Entry
LGH83_18985 CDS
T07621
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LGH83_18985 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
liz01007
]
LGH83_18985 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liz03016
]
LGH83_18985 (trpS)
Enzymes [BR:
liz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
LGH83_18985 (trpS)
Amino acid related enzymes [BR:
liz01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LGH83_18985 (trpS)
Transfer RNA biogenesis [BR:
liz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LGH83_18985 (trpS)
Prokaryotic type
LGH83_18985 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
UDL94556
LinkDB
All DBs
Position
4032771..4033826
Genome browser
AA seq
351 aa
AA seq
DB search
MTDAASQPAAIRPRVFSGVQPTGNLHLGNYLGAITRFVSLQEAHECLYCVVDLHAITVPQ
NPEDLRSSIRDVTAAFLAAGIDAKRHIVFNQSRVAEHAELAWVLNCVARLGWLNRMTQFK
EKAGKDRENASVGLYAYPALMAADILVYRAAFVPVGEDQKQHLELARDIAQKFNNDFAAE
IEARGQGEAFFPLPEPLIQGPATRVMSLRDGTKKMSKSDPSDNSRINLVDDAETIAQKIR
RAKTDPDALPSEIEGLAGRPEADNLVGIYAALSGEAKQEVLRQFGGGQFSGFKGALVDLA
VAKLGPIGTEIRALRADPGHIDRVLADGAERARAIARPTMDAVKDIVGLLR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccgcctcccagcccgccgcgatccggccgcgcgtcttttcgggcgtgcag
cccaccggcaatctgcatctcggcaactacctcggcgcgatcacccgtttcgtgtcgctg
caggaggcgcatgagtgcctctattgcgtggtcgatctgcatgccatcacggtgccgcag
aaccccgaagatctgcgctccagcatccgcgacgtgaccgcggctttcctggcggccggg
atcgacgcgaagcggcacatcgtcttcaatcaaagccgggtcgccgaacatgcggaactc
gcctgggtgctgaattgcgtggcccggctcggatggctcaaccggatgacgcagttcaag
gaaaaggccggcaaggaccgcgagaacgcgtccgtcgggctctatgcctatccggccttg
atggcggccgatattctggtctaccgcgccgctttcgtgccggtcggtgaggatcagaag
cagcatctcgaactggcgcgcgacatcgcccagaagttcaacaacgactttgcggctgag
atcgaggcgcgtggtcagggagaagccttttttccgctccccgagccgctgatccagggc
cccgcgacgcgtgtcatgagcctgcgcgacggcaccaagaagatgtcgaaatcggatccc
tccgacaattcccgcatcaatctcgtcgatgatgccgagacgatcgcgcagaagatccgc
cgggccaagaccgaccctgacgcgctgccgtcggagatcgaggggttggccgggcggccc
gaggccgacaatctcgtcggcatctatgcggctctgtcgggggaggcgaaacaagaggtg
ctgcggcagttcgggggcggccagttctccggcttcaagggggctctggtcgatctcgcg
gtcgccaaactcggaccgatcggcaccgagatccgggccttgcgggccgaccccggccat
atcgatcgggtgctggccgatggggcggagcgtgcgcgcgccatcgcccggccgaccatg
gatgccgtgaaggacatcgtcggcctcttgcgttag
DBGET
integrated database retrieval system
