Lichenihabitans sp. PAMC28606: LGH83_19305
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Entry
LGH83_19305 CDS
T07621
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGH83_19305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
liz02000
]
LGH83_19305
Transporters [BR:
liz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LGH83_19305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
UDL94613
LinkDB
All DBs
Position
4101410..4102525
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AA seq
371 aa
AA seq
DB search
MNDAFQKDCLEILAGKVERGEISRRRFAQIAAMVLAGAPLALRAGGARAADGQLVLVNWG
GDALKAYDAAYGQAFQKATGITVKEDGTGPTEGAITAQFKSGKPTWDLVDADPFSAISLG
HQGMIEPIDYTVVDKAKMRPGFAWDYAASTYFFSYIIAYDAQKFGKNPPTGMADFFDVKK
FPGKRSMYKWGVGMWEAALLADGVAPEKLYPLDLKRAHDKIAAFKENVSSYWGGGAESQQ
VMLSGDASMGLIWSTRASLLDKDPSGQVKFIWDQGLISPGALAVIKNNPGGKANAMSFIA
STTDPKKQLVMFDMLGQGPANPATDALIPVDQQKYNPVDPANMTKQIALDMPWYAENYGA
ALDTYTKIISA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgcctttcaaaaagactgtctcgagattttggccggcaaggtcgagcgcggc
gagatcagccgccgtcgctttgcgcagatcgccgccatggtgctggcgggcgcgcccctg
gcgctgcgggctggcggggcccgagcggccgatgggcagctcgttctcgtcaattggggt
ggcgacgctctcaaagcgtatgacgcggcctatggtcaggcatttcagaaagccaccggc
atcacggtcaaggaagacggcacgggaccgaccgaaggcgccatcacggcgcagttcaag
agcggcaagccaacatgggatctcgtcgatgcagacccgttttcggcgatctcgctcggc
catcagggcatgatcgagccgatcgactatacggtcgtcgacaaggccaagatgcggccc
ggcttcgcctgggactacgcggcctcgacctacttcttctcgtatatcatcgcctatgac
gcgcagaagttcggcaagaatccgccgaccggcatggccgatttcttcgacgtgaagaag
ttccccggcaagcgctcgatgtataaatggggcgtcggcatgtgggaggcggcgctgctg
gccgatggcgtcgcgcccgagaagctctatccgctcgacctcaagcgggctcatgacaag
atcgcggccttcaaggagaatgtctcctcctactggggaggcggcgccgaaagccagcag
gtgatgctgagcggcgatgcctcgatggggctgatctggtcgacccgcgcgagcctgctc
gacaaggacccaagtggccaggtgaaattcatctgggaccagggtcttatctcgccgggc
gcgctggcggtcatcaagaacaaccctggtggcaaagccaacgccatgtcgttcatcgcg
agcaccaccgatcccaagaagcaactcgtgatgttcgacatgctcgggcaggggccggcg
aaccccgctaccgatgcgctgattcccgtcgatcagcagaagtataatccggtcgatccc
gccaacatgacgaagcagatcgcgctcgacatgccctggtacgccgaaaattacggcgcg
gccctcgatacctacacaaagatcatttcggcctga
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