Lichenihabitans sp. PAMC28606: LGH83_19515
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Entry
LGH83_19515 CDS
T07621
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGH83_19515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liz03019
]
LGH83_19515
Enzymes [BR:
liz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LGH83_19515
Messenger RNA biogenesis [BR:
liz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LGH83_19515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UDL94649
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Position
4152775..4154070
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AA seq
431 aa
AA seq
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MTEGKGFSRPLRLDASGRLADVAFLAGPALARVLAMLNQDGEEARVVGGAVRNALLGLPA
GDIDIATTALPDIVVARAKTAGLRPLPTGIAHGTITVMVGRAGFEVTTLREDVETDGRHA
IVRFGRDFTADAQRRDFTVNALSLSADGTVHDTTGGLADLAAGRVRFIGEADRRIREDYL
RVLRFFRFSATYAEGPFDPEGLRAATLHRDALTRLSRERIRVEVLKLLVAPRAAEVTTSM
ATAGIARVIFGGACDPLRLVRLIAIETARRESPDAILRLAALAVRTEGDAARLREQLRLS
NEEATRLAAAAHVRGGLDPEAVPTHAGLLALLFDHGRRAALDGVSLAEVDAKGNGSGWTE
AYGVVATAAEPKLPLGGADVMARGVHSGRDVGIVLKQFRQEWIAAGFPSDPIVVAGLLDA
IVAIHLADDRR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgacggaggggaaggggttttcgcggccgctgcggctcgatgcctcggggcgattggcc
gacgtcgcctttttggcgggaccggcgcttgctcgcgtgctcgccatgctgaaccaggat
ggcgaagaggcgcgtgtcgtcggcggggctgtccgcaacgcgctcctcggactgccggcc
ggcgatatcgatattgcgacgacggcactgcccgacatcgtcgtggcgcgcgccaaaaca
gccggcttacgccccctgccgaccggtatcgcgcatggcaccatcacggtgatggtcggc
cgcgccggtttcgaggtgacgaccctgcgggaagacgtcgaaaccgacggacggcacgcc
atcgtccgcttcgggcgagacttcacggcggacgcgcagcggcgggatttcaccgtcaat
gccttgtcgctatcggccgacgggacggtgcacgatacgacgggcggcctcgcggatctc
gcggccgggcgcgtgcgtttcatcggcgaggcggaccgccggatccgcgaggactatctg
cgcgtgctgcggttcttccgcttttcggccacctatgccgaaggcccgttcgatcccgag
gggctgcgcgccgcgacgctgcatcgcgacgccctgacccgcttgtcgcgtgagcgcatt
cgcgtcgaggttctgaagcttctggtcgccccccgcgccgcagaggtgacgaccagcatg
gcgacggccgggatcgcgcgcgtgatttttggaggggcgtgcgatccgctgcgcctcgtc
cggctgatcgcgatcgagacggcgcggcgggagagccccgacgcgatcctccggcttgcc
gctctggcggtccgaaccgaaggtgatgcggcgcggctgcgtgaacagctgcgtttgtcg
aacgaggaagccactcggctcgcggctgcggctcatgttcgcggtggtctcgatcccgaa
gccgtgccgacacatgccggcttgctggcgttactgttcgatcatggacgccgtgcagcg
ctggacggcgtgtcgctggccgaagtcgatgccaagggcaacggatcgggctggaccgag
gcttatggcgtcgtggccacggcggccgagcccaagctccccctaggaggagccgatgtc
atggcgcgcggcgtccacagcggacgcgatgtcggtatcgtcctcaagcagttccggcag
gagtggatcgcggcgggcttcccatccgaccccatcgtcgtcgcaggcttgctcgatgcg
atcgtcgctatccatctcgccgacgacagacgctga
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