Lotus japonicus: 130709493
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Entry
130709493 CDS
T04348
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130709493
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130709493
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Motif
Pfam:
Glyco_hydro_28
Arf
Motif
Other DBs
NCBI-GeneID:
130709493
NCBI-ProteinID:
XP_057414847
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Position
1:74536284..74545530
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AA seq
415 aa
AA seq
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MFFRQMILLACFHLDLHMSGISIGDFPLGYCVYWLRKRLFFKQEMELSLIGLQNAGKTSL
VNVVDAFVKAWNDLCAATQGAPTLLIPKGKSFMLQPVSFKGPCKTNNVNIELQGTLVAPK
SVVAWKWANNNKGAWIDFSGINGLVIRGGGTFDGQGATWWAKYSDDSDRPSALRFHSCKN
LALSATNHINSPRNHISISTCSDSSISNIHVTAPEESPNTDGIDISGSTNILIKDSTIRT
GDDCIAINDGSSFINITGITCGPGHGISVGSLGRDRKFETVEEVHVRNCIFQGTTNGARI
KTWQGGSGYARKITFEDIILDEAENPIIINQNYRAYQRNGLAEAVKVSEVTFRNFTGTSA
SEEAITLNCDPTVGCTGIILNKINIKYVSAGKRTRALCNNVRGSFSLCSPNVVCS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcagacagatgatattgttagcttgcttccatttggatcttcatatgtcaggg
atttccattggggattttccccttggttattgtgtttactggttacggaaacgacttttc
ttcaagcaggaaatggagttatcgctgataggacttcagaatgctggaaagacttccctt
gtaaatgttgttgatgcttttgtgaaagcatggaatgatttgtgtgctgcaactcaaggt
gccccaacacttctcatacccaaagggaaatcattcatgttgcaacctgtgtcatttaaa
ggtccttgcaaaactaacaatgttaacattgagcttcagggcactcttgttgcccctaaa
agtgttgttgcttggaaatgggcaaataataataagggagcatggatcgatttctcaggc
ataaatggccttgttattaggggaggaggaacattcgatgggcaaggtgctacatggtgg
gccaagtactctgatgattctgacaggccaagtgcacttcggtttcatagctgtaagaat
ctagcgcttagtgcaacgaatcacatcaacagcccaagaaatcacataagtataagtaca
tgcagtgactctagcatttccaatattcatgttactgccccagaggaaagtcctaacacc
gatgggattgatatctcaggatcaactaacatcctcattaaggattctacgatccgaact
ggagatgattgcattgccatcaatgatggttcctcttttatcaacataactggtattaca
tgtggtcctggccatggcatcagtgttgggagcctcgggagagatagaaagtttgaaaca
gtagaagaggtacatgtgagaaattgcatcttccaaggaaccacaaatggtgccagaatc
aagacatggcagggaggatctgggtatgcgaggaagataacttttgaagatattatactc
gatgaagcagagaaccctatcatcattaaccaaaattatagggcttatcaacgtaatggt
cttgcggaggcagtgaaagtgagtgaagttactttccgtaacttcacaggaacctcagct
tccgaggaggcaatcacactaaattgtgaccctaccgtcggctgcaccggcattatatta
aataagattaacataaaatatgtatccgcagggaaaagaacacgtgcattgtgtaataat
gttcgtgggtcattctctttatgtagtccaaatgttgtctgttcttga
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