KEGG   Lotus japonicus: 130709523
Entry
130709523         CDS       T04348                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lja  Lotus japonicus
Pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130709523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    130709523
   03041 Spliceosome [BR:lja03041]
    130709523
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     130709523
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130709523
Spliceosome [BR:lja03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    130709523
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 130709523
NCBI-ProteinID: XP_057414890
LinkDB
Position
3:4559921..4563207
AA seq 460 aa
MAMMDPTKKRKLDENGYGVVGGGDIDHLILSPSEARKIIERFTQDQLIDILQDAVVRHPD
VLVSVRALADPDVAQRKLFIRGLGWDTTTDGLRSLFSAYGELEEAVVILDKVTGKSKGYG
FVTFRHVDGALLALREPSKRIDGRVTVTQLAAAGNSGSNTNAADVALRKIYVANVPPDLP
ADKLLAHFSIYGEIEEGPLGFDKLTGKSKGFALFVYKNPEGAQAALLDPMKTVEGRQLNC
KLAITDGGKQGKRGGAGAGAAGPEVAQGHGNSHGHHGDGMGMAPGGGAGSGAGSLSGGQY
GGPVGLGSYGGFGGGLQGQPPIGNHAMNPSVGGVGNQANQSSLGGGTGAYGLAAHYGGYG
GLGSTGFGGLGAACAGAGGFGGGGGGGGAGSAAGAGAPGGLGGPGGAYRSSAGMQAGGYP
EGGHHYSLSGPGGYHNQQHHPPTGASPVPRVPYPNAHPYY
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggccatgatggatcccaccaagaagcgcaagctcgacgaaaacggttacggcgtcgtc
ggcggcggtgacatcgaccacctaatcctctccccatcagaagcccgcaagatcatcgaa
cgcttcacccaagaccaactcatcgacatcctccaagacgccgtcgtccgccaccccgac
gtcctcgtctccgtccgcgccctcgccgaccccgacgtcgcgcagcgcaagcttttcatc
cgcggcctcggctgggacaccaccaccgacggcctccgctctctcttctccgcctacggc
gagctcgaagaagccgtcgttattctcgataaagtcaccgggaaatcgaaagggtacggt
ttcgtcacgttccgccacgtcgacggcgcgcttcttgctctccgggagccgagtaagagg
atcgatgggcgcgttactgtcacgcagcttgctgctgctgggaactccgggtcgaatacc
aatgctgccgacgtcgcgcttcggaagatctatgtggcgaatgtgccgccggatctcccc
gctgataagcttctggcgcatttttcgatctatggggagattgaagaggggccgttgggg
tttgataagctgaccgggaagtcgaaagggtttgcgctgtttgtgtataagaatccggag
ggggcgcaggcggcgcttttggatccaatgaagactgtggaggggaggcagttgaattgc
aagctggctataactgatggcgggaagcaagggaagcgtggcggggctggtgctggtgcg
gcgggaccggaggtggctcaggggcatgggaattctcatgggcatcatggggatgggatg
gggatggctccgggtggtggggcgggttcaggtgcagggtcgctttctggtggtcagtat
ggtggtccggttgggttgggttcttatggtggatttggtggtgggcttcagggtcagcca
ccgatagggaatcatgctatgaatccatcggttggtggggttggcaatcaggcgaaccag
tcatcgttgggtggtggtactggcgcatacggtttggctgctcattatgggggctatggt
gggcttggatctaccggtttcggtggattgggtgctgcttgtgctggtgctggtggtttt
ggaggtggtggtggtggtggtggtgctggttcggcagctggtgctggtgctcctggtgga
cttggtggtccgggtggtgcgtataggagttcagctggaatgcaagctggtgggtatcca
gagggtgggcaccactacagtttatcaggtcccggcgggtatcacaatcagcagcatcat
cctcctactggggcgtcacctgttcctagggttccatatccaaatgctcacccttactat
tga

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