Lotus japonicus: 130709882
Help
Entry
130709882 CDS
T04348
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
lja
Lotus japonicus
Pathway
lja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130709882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
130709882
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lja03037
]
130709882
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130709882
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
130709882
Chromatin remodeling factors
SRCAP complex
130709882
INO80 complex
130709882
INO80 complex (yeast)
130709882
SWR1 complex
130709882
ASTRA complex
130709882
Cilium and associated proteins [BR:
lja03037
]
Motile cilia and associated proteins
Dynein assembly factors
130709882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
AAA_22
RuvB_N
AAA_5
AAA_19
AAA_16
AAA_18
Mg_chelatase
AAA_25
DnaB_C
TsaE
AAA_7
AAA_11
bpMoxR
NPHP3_N
nSTAND3
AAA_28
IstB_IS21
RNA_helicase
NACHT
AAA_33
Motif
Other DBs
NCBI-GeneID:
130709882
NCBI-ProteinID:
XP_057414997
LinkDB
All DBs
Position
4:complement(75047621..75051692)
Genome browser
AA seq
435 aa
AA seq
DB search
MIRQKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLME
NFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDP
TIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEI
VQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKEVVNRYIDEGVAE
LVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMASPHGIPVDL
LDRLAIVRTLIYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPAS
IVAQIHSSFHSSSNSLHLLNINNAIHSIGKPESQLVHGVNPVNIAELSPAPYTSLQLQNF
EGHECDIPRDTGRDQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatacgccagaagaagatggctggccgtgccctcctccttgccggaccgcctgggacc
ggcaagactgctttagcactcgggatatgtcaggagctcggaaccaaggttccattttgc
ccaatggttggctcagaagtatactcatcagaagtaaagaagacagaagttcttatggaa
aatttccgacgggctattggtctgcgtattaaggaaaacaaggaagtatatgaaggagag
gtaaccgagctctctccagaagaaactgagagcgtaacaggcggttatggtaaaagtatt
agtcatgtgataattgggttgaagacagtgaaaggaaccaagcaactcaagttggacccc
accatatatgatgctttgattaaggaaaaggtagctgttggggatgttatatatattgaa
gcaaatagtggggctgtgaaaagggtaggccgaagtgatgcttttgctacagagtttgac
cttgaagcagaggaatatgttccacttcctaaaggagaggttcacaaaaagaaggagatt
gttcaggatgtaaccctacatgatctggatgctgccaatgcacgacctcaaggagggcaa
gatattctatctcttatgggtcagatgatgaaacccaggaaaacagaaatcactgacaag
ttgagacaagaagttaataaggaggttgtcaaccgatatattgatgaaggtgtagcagag
cttgttcccggagttctgtttattgatgaggtgcatatgctagatatggagtgtttttcc
tatcttaatcgtgctttagagagctccctatctccaatagttatctttgctacaaataga
ggaatttgcaatgtgagagggactgatatggccagtcctcatggcatacctgttgacctg
ctggaccggctggcgatcgttcgaacactaatctatggtcctgctgagatgatacagatt
ctagctatccgtgctcaagtagaggaactggttgtggatgaggaaagtttagctttccta
ggggagattggacaaaggacatctttaaggcacgcggttcagcttttatcacctgccagc
attgttgcacaaattcactcttcatttcattcttcatcaaacagcctacaccttctcaac
ataaacaatgcgatccacagcattggtaaaccggaatctcagctggtccatggagttaat
cccgttaacatcgcagaattgtctccagccccctacacatctttgcaactccagaatttt
gaaggacatgaatgcgatattccccgggatacaggaagggaccaatga
DBGET
integrated database retrieval system
