Lotus japonicus: 130709930
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Entry
130709930 CDS
T04348
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lja03016
]
130709930
Enzymes [BR:
lja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
130709930
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130709930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
TRM5-TYW2_MTfase
Beta-prop_TYW4
Kelch_HCF
Kelch_2
Kelch_FKB95
TYW2_N_2
NANM
DUF6242_C
Beta-prop_Calicin
MTS
DNA_methylase
Methyltransf_15
Cons_hypoth95
DUF1668
PrmA
Motif
Other DBs
NCBI-GeneID:
130709930
NCBI-ProteinID:
XP_057415045
LinkDB
All DBs
Position
4:1848683..1855792
Genome browser
AA seq
1038 aa
AA seq
DB search
MEFEKRKASSLASLYSTETDKSPKGTLDTPIIPLINTLNQNPSFFTTSSCSGRISILSQP
LLSPLSPSPKKKARGGSWLLVSHEPADPDAVAALLFPTPTLSESTQSELVFRFEPLIIAV
ECRDLASAHSLVSLAISSGFRESGITNANKRVIIAIRCSIRMEVPLGDTHNLMVTPEYVR
YLVRVANDKMEANRKRTERFHALLLQSNSNGSQLLPVNNAAGLVCDHLQLDDESQLANGN
AETNSGFVSSPGSSLSLSISHIEIVGEPVEKLFLWGHSACALDNADHKKVIVYGGFGGPG
RHARRNDLLLLDPYSGNLETINIFDGKSPSPRLGHTASLVGDRMFVIGGRTGPDKILSDV
WIFDTTKNHWKLQQCGGSVFPPRHRHAAAVFGSNIYVFGGLDNDVIFSSFYILDTTNSLW
KEIPISGDWPRARHSHAMVASDSQIFIFGGYNGGKTLGDLYSFDVQKGQWKKEKTAGRNP
HARFSHSVFVYKNYLGVLGGCPLRQHYQELALLDLKLRMWRHVTLNSVGKDLFVRSTANV
VGDDLVIVGGGAACYAFGTKFSEPAKVSLLHLMQSHDDDLVAVKNQRKHMINQNKGMGGN
KIENSQEPQLEHAPNISEDEILYFNDSVTGSNDQNQMIPLHYVLCLENKYAKLGKDMLKK
FGWLDLGRKAYSEEGGARICFPVLQEFFAVFHGSNRHSGDEIGGNNEIPFSKLNELSCSR
ALTLLHEYGAVLLADKVVESKKSVKSPLKVMTEAVTLLIENHGLPTWLLEELPTRWDRLG
DIVVLPTTSFKNSLWDSIGEELWPIVSKSLKAHRLARQGPVAATGTRDSTLQILIGENGW
VNHRENGILYSFDATKCMFSWGNLSEKLRMGRQDCKDEVIVDLFAGIGYFVLPFLVRAQA
KLVYACEWNPHAIEALQHNLKANSVADRCIILEGDNRNTAPKGVADRVCLGLIPSSECSW
VTAVRALRREGGMLYVHGNVKDSEECQWTDHVSKSIDEIATSEGYCWEVSIEHVERVKWY
APHIRHVVADVRCRQIQR
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagaagagaaaagcatccagtctagcctcactgtactcaacggaaaccgac
aaatcaccgaagggaacgttggacacacccatcatccctctcatcaacactctcaaccaa
aacccttctttcttcacaaccagttcctgctccggccgaatctccatcctctctcaaccc
cttctttcaccactttctccatcccccaagaagaaagccagaggcggctcctggctcctc
gtttcccacgaacccgccgatcccgacgccgtcgccgccctactcttccccacccccacc
ttatccgagtcaactcagtctgaactcgtcttcagattcgagcccctcatcatcgccgtc
gagtgcagagaccttgcttccgctcactcgcttgtttccctcgctatttcctccggtttc
agagagtccggcatcaccaatgctaacaagcgggttatcattgccattcgctgttccatt
cgaatggaggtaccgttgggagacacgcataacctcatggtcacccctgagtatgttcgt
tatcttgttcgcgtcgcaaatgataaaatggaagctaataggaaaagaactgagaggttt
catgcattgttgctgcagtctaactctaatggatcccagttattgcctgtcaacaacgcg
gcggggcttgtttgtgatcatcttcaacttgatgatgaatctcagttagcaaatgggaat
gccgaaaccaattcagggtttgtgagttctcctggttctagtctcagtctgtcaatttcc
catattgaaattgttggtgaaccagtagagaaacttttcctttggggccactcagcctgt
gctttggataatgccgatcacaagaaagtcattgtgtatggtggctttggagggccaggg
agacatgccagaagaaatgatttattgctgcttgatccatattctggtaatcttgaaacg
atcaacatatttgacggcaagtctccatctccgcgcttaggccatacagcttccttggtt
ggagatcgcatgtttgtgattggtggtcgaactggtcctgataaaattctgagtgatgta
tggatctttgacacaactaagaatcattggaagttacagcaatgtggtggcagtgtcttt
cctcccaggcatcgccatgctgcagctgtatttggttcaaacatttatgtatttggagga
cttgataatgatgttatcttttcctccttctacattcttgacacaaccaattcactctgg
aaagaaataccaatttccggggactggccacgggcacgtcactctcatgcaatggtggca
tctgattctcaaatttttatttttggtggatacaatggtgggaaaacacttggggatttg
tatagctttgatgttcagaagggtcaatggaaaaaggaaaagacagctggaaggaatcca
catgctaggttctcccattcagtttttgtctataagaattatcttggagttcttggtggt
tgtccactgagacaacattatcaagagttggctttacttgatttgaagcttcgtatgtgg
aggcatgttacccttaattctgtaggtaaagatttatttgtgcgtagtacagccaatgtt
gttggtgatgatctagttatagtcggtggtggtgcagcatgctatgcatttggaaccaag
ttcagtgagccggcaaaagtcagcttgctccatttaatgcaatcacatgacgatgacctt
gtggctgtcaaaaatcaaagaaagcatatgattaaccaaaataaaggaatgggcgggaat
aagattgaaaactctcaagaaccccaacttgaacatgcaccaaatatatctgaagatgag
attttatattttaatgatagcgtaactggctccaatgaccaaaatcagatgattccattg
cattatgttctttgtctagaaaataaatatgcaaaattgggaaaggatatgttgaagaaa
tttggatggttagacttagggaggaaggcatactctgaagaaggtggagcacgtatctgt
tttccagttcttcaagaattttttgctgtatttcatggtagtaatcgtcattcaggagat
gaaattggtggaaacaatgaaattccgttttctaagttgaatgagttatcctgttctaga
gcgttgacccttctccatgaatatggtgccgttctgctagcagacaaagttgtcgagtcc
aaaaaatctgtgaagtctcctttgaaagtgatgactgaagcagtaacattgttgattgag
aatcacggcctaccaacatggcttctagaggaactgccaacaaggtgggatcgacttgga
gatattgttgtacttccaactactagttttaagaattccttgtgggactctatcggagaa
gagctctggcccattgtttccaaatcacttaaggcccatcgtcttgctcgccaaggccca
gttgctgcaactggaacaagagatagcacgttacagattctcattggagaaaatggctgg
gtcaatcatcgagaaaatggaattctctattcttttgatgctacgaaatgcatgttttca
tggggcaatctttctgagaagctccggatgggcaggcaggattgtaaggatgaggttata
gtagatctgtttgcgggcattggctacttcgtgctgccttttcttgttagggcccaggca
aaacttgtatatgcttgtgagtggaatccccatgccatagaagcactccaacataattta
aaagcaaattctgttgctgaccgttgtatcatacttgaaggagataatcgaaatacagct
cccaagggtgtggccgatagagtctgtcttggtctcattccatccagtgaatgtagctgg
gtcacagctgtgagggctctaaggagagagggtgggatgttatatgtccatgggaatgta
aaggattcagaggagtgtcagtggactgatcatgtttcaaagtctatagatgaaattgct
acatctgaaggttattgttgggaggtttctatagaacatgttgagagggttaaatggtat
gctccacacattcgccatgtggtcgctgatgtaagatgcagacagatccaaagataa
DBGET
integrated database retrieval system
