Lotus japonicus: 130709971
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Entry
130709971 CDS
T04348
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130709971
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130709971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Prp19
CAF1C_H4-bd
Beta-prop_EML_2
Beta-prop_WDR19_1st
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR75_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
130709971
NCBI-ProteinID:
XP_057415094
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All DBs
Position
4:72088476..72090646
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AA seq
476 aa
AA seq
DB search
MARGIKHRMKKKKGSKKGDGSSSSSSSSREPPQVPLKVWQPGVDKLEKGEELQCDPSAYN
SLHAFHIGWPCLSFDIVRDTLGLVRKEFPHTAYFIAGTQAEKASWNSIGVFKVSNISGKR
RELQVDDSGMDMDGGEDSDSDSDSDSDSDSDDEEDGVKGPNLQLRKVTHEGCVNRIRCMP
QNPHICANWADTGDVQIWDMSSHLNSLAETETVTTENAVVVNQVPSQKFKHKDEGYAIDW
SPVVPGRLVSGDCNNCIYLWEPNSAAATWSVDNAPFIGHTASVEDLQWSPKDHDIFASCS
GDGSIAIWDTRLGKKSPTASFKAHKADVNVLSWNRLADCVLLASGSDDGSVSIHDLRFVK
EGEYSVSVVAHFEYHKHPITSIEWSPYEVSSLAVSSEDNQLTIWDLSLERDEEEEAVFQA
KTKEQVVNAPQDLPPQLLFIHQGQKDLKELHWHSQIPGMIVSTAADGFNILMPSNI
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcggcataaaacatcgcatgaagaagaaaaagggctccaagaaaggtgatggc
tcttcttcttcatcatcatcttctcgggaaccaccgcaagttccattgaaggtgtggcaa
ccgggtgtggacaagttggagaaaggtgaagagcttcagtgtgatccctccgcttacaac
tccctccacgcttttcacattggatggccatgtctcagcttcgacattgtacgtgacact
cttgggttagtccgaaaagagtttccccacactgcgtatttcattgcaggaactcaggcg
gagaaagcttcatggaattcaatcggggttttcaaagtgtcaaatatttctggtaagaga
cgtgaacttcaagttgatgattctggcatggatatggatggtggtgaggacagtgacagt
gacagtgacagtgacagtgatagtgatagtgatgatgaagaagatggtgttaagggtcca
aatttgcagttgaggaaggtaactcatgaagggtgtgtgaaccgtatacgctgcatgcca
caaaatccacatatatgtgcaaattgggcagatactggtgatgtgcagatttgggacatg
agctctcatctcaattctctagcagagacagagacagtgacaacagaaaatgcagttgtt
gttaatcaggttccatcacagaaatttaagcacaaagatgaaggttatgctatagattgg
agtcctgttgttcctggaaggcttgtatctggggattgcaataattgtatttatctctgg
gagcctaattctgctgctgcaacatggagtgttgacaatgctccctttattggacatact
gctagtgttgaagacttgcaatggagccctaaggatcatgatatttttgcttcttgttct
ggggatggaagcattgctatatgggatacccgtttggggaagaagtcgccgaccgcgtct
ttcaaagcgcataaagccgatgtgaatgtgttgtcatggaacaggttggctgattgtgtc
ttgttggcatctgggagtgatgatgggagtgtttctattcatgatctcagatttgtcaag
gaaggagagtattctgtttctgtggtagcacattttgaataccataagcacccaatcaca
tccattgagtggagtccatatgaggtttcttcattggctgtttcatcggaagataatcag
ctcacaatttgggacctttctttagaaagggatgaggaagaggaggctgtatttcaagct
aaaaccaaagaacaagtagtgaatgctcctcaagatctgcctccacagctattgtttatt
caccagggacagaaagaccttaaagaactgcattggcactcacagattcctggaatgatt
gtgtctactgcagcagatggattcaacatcctcatgccttcaaatatttag
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