Lotus japonicus: 130710238
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Entry
130710238 CDS
T04348
Name
(RefSeq) E3 ubiquitin ligase PQT3-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130710238
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130710238
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
U-box type E3
130710238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130710238
NCBI-ProteinID:
XP_057415420
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All DBs
Position
4:46679838..46687754
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AA seq
838 aa
AA seq
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MAVYYKFKSARDYDSIPMDGPFISVGTLKEKIFESKHLGRGTDFDLVVTNAQTNEEYLDE
EMLIPKNTSVLIRRVPGRPRLPIVTEQEPKVENMVVETEPENSSLPAYNPTGMNYPEDSE
WDEFGNDLYTIPDQLPVQTSNLTPEAPPPTNQADEESKIKALIDTPALDWQRQGSDFGSG
RGFGRGGGRMGGGRGFGLERKTPPQGYICHRCKVAGHFIQHCPTNGDPNFDIKRVKQPTG
IPRSMLMANPHGSYVLPNGSAAVLNPNEAAFEKEIEGMPSTRSVGDLPPELHCPLCNNVM
KDAVLTSKCCFKSFCDKCIRDYIISKSVCVCGATNVLADDLLPNKTLRDAINRILESGNS
STENAGSTFQAQDMESARCPQPRLPSPTSSAASKGELKITPVNEETSNIQDIADETKAVS
APQQTSEQVRIPRVADVSEATHESISVKEPASQGSAQQVEEEVQQKLVPTEAGNVGKKKK
KKKVRMPTNDLQWKNPHELGAENYMMQMGPPPGYNPYWNGMQPCMDGFMAPYAGPMQMLG
YGQDPFGMPFANGFPQDPFGMQGYMMPGFPPHRDLADFSMGMNVPPPPPVMSREEFEARK
ADLRRKRENERRGERDFSKEREFGREASSVGDVSSMKPKTQKPFPPPPSSDYHHHRHRSE
RPSPDREVEPPRPAKRKSEHISDRQRDDKDRDRDHERHHHRHPRPESSSSRRSSEPVTKS
SSNSAAAAAAAADQKHKASVFSRISFPAEEEAAKKRKVTAPSPTESSAVGSTAASASANG
YYQGRKSSKVVPDYESSDDERHFKRRPSRYEPSPPPPAADWEEEGGRHSRGSRERKHR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtattataaatttaagagtgcaagagattatgattcaattcccatggacggt
cctttcatctctgttggtactttgaaagaaaaaatatttgaatccaagcatttaggaaga
ggaactgatttcgaccttgtggtcaccaacgcccagaccaatgaagagtatcttgatgaa
gaaatgttgattcctaaaaatacctcagtcttaattcgtcgagttccaggacggccacgt
ttaccgattgttactgagcaagaaccaaaggtggaaaacatggtggtggaaactgaacct
gaaaacagtagcttaccagcttataatccaactgggatgaattatcctgaagattcagaa
tgggatgaatttggcaatgatttgtatactatacctgatcaactgcctgttcaaacaagc
aacttaactccagaggctcctcctcctactaaccaagctgatgaagaaagtaagattaag
gccttgattgatactccagcgttggattggcaacgtcaaggttctgactttggctctggt
agaggttttggaaggggaggtggacggatggggggtggacgtggttttggcttggagcgg
aaaacacctccacaaggctatatatgtcacagatgcaaggtggctggacattttattcag
cactgccctacaaatggtgatccaaattttgacatcaaacgagtcaaacaacctactggt
attccaaggtcgatgctgatggcaaatccacatggctcctatgttttaccaaatggttca
gcagctgtcttgaacccaaatgaagctgcttttgagaaagaaatagaagggatgccatca
acacgttcggttggggatctaccacctgagctccactgccccttgtgtaataatgtcatg
aaagatgctgtactgacaagcaagtgctgttttaaaagcttctgtgacaaatgtattagg
gactatattatctccaaatctgtgtgcgtatgtggcgcgacaaatgttcttgcagatgat
cttttacctaataagacgctaagagatgccatcaatcgcatattggagtcaggcaatagc
agtactgagaatgctggtagcacgtttcaagctcaagatatggagtctgctcgctgtcca
cagcctaggcttccatctccaacctcatcagctgcgtctaagggagaactaaagattaca
cctgttaatgaagaaacgtcaaatatacaggatattgcagatgagacaaaggctgtttct
gctccacagcagacatccgagcaagtaaggatccccagagttgctgatgtatctgaagct
actcatgagtcaataagtgtgaaggaaccagcctcacaagggagtgctcagcaagttgag
gaagaagtgcagcaaaagttggttcctactgaggcaggtaatgtagggaagaaaaagaaa
aagaagaaagtccgtatgcctacaaatgatttgcagtggaaaaacccacatgagcttgga
gcggagaactatatgatgcaaatgggtccaccccctggctataatccgtactggaatggc
atgcaaccttgtatggatggatttatggcaccgtatgctggtccaatgcaaatgttgggt
tacggtcaagacccatttggcatgccatttgcaaatggtttccctcaagacccatttggc
atgcaaggttacatgatgcctggttttccacctcatagggatcttgctgacttcagcatg
gggatgaatgttccacccccacccccagttatgagtagagaggagtttgaagctagaaaa
gctgatctgaggaggaagcgtgaaaatgagagacggggtgaaagggatttctccaaagaa
cgtgaatttggtcgggaagcaagcagtgttggggatgtttcttcgatgaaaccaaaaact
cagaagccatttccaccgccgccaagcagcgattaccaccaccaccgccaccgttcggaa
cggccgtcgccagatcgcgaggtggaacctccacgcccagccaaaagaaaatctgagcac
atctccgatcgtcaacgcgatgacaaggatcgggatcgcgaccatgagcggcaccaccac
cgccatccccgacctgagtcctcctcatccagaaggtcatccgagccagtgaccaaatcc
tcatcgaactcggcggcagcagcggcggccgccgcagatcagaagcacaaggctagcgtg
ttctcccgcataagcttccctgctgaggaagaagccgcgaagaagagaaaggttaccgct
ccttccccaacggaatcttcagctgttggctccaccgctgccagtgcatcggcgaacggt
tattatcaagggaggaagagcagtaaggtggttccggattatgaatctagcgacgatgag
cggcatttcaaacggcggccgtcgaggtacgagccgtctcctccgccgccggccgccgat
tgggaggaggaaggaggaagacattcgagaggatcgagggaacgcaagcatagataa
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