Lotus japonicus: 130710282
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Entry
130710282 CDS
T04348
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K14485
transport inhibitor response 1
Organism
lja
Lotus japonicus
Pathway
lja04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130710282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130710282
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130710282
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
130710282
NCBI-ProteinID:
XP_057415467
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Position
4:complement(5896098..5900851)
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AA seq
623 aa
AA seq
DB search
MECRIRKKESPEPNILNQASPFPDEVLERVLGMVKSRKDRSSVSLVCKEWYNAERWSRRS
VFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPANWGADIRSWLVVFADKYPLL
EELRLKRMTVSDESLEFLALSFPYFKALSLLSCDGFSTDGLAAIATSCKNLTELDIQENG
IDDKSGNWLSCFPESFTSLEVLNFANLPNDVNSDALEKLVSRCKSLKTLKVNRSVTLEQL
QRLLVRAPQLCELGSGSFSEDDLTAQQYSEIESAFNNCKNLHTLSGLWDPAEQYLPLLYP
ACTNLTFFNLSYAPLDGDDLAKLLVHCPNLRRLWVVDTVEDKGLEAVGSHCPLLEELRVF
PADPFEDEAIGHGVTESGFVALSRGCPRLHYVLYFCRQMTNAAVATVVQNCPDFTHFRLC
IMNPGQPDYLTHEPMDEAFGAVVKTCSKLQRLAVSGLLTDLTFEYIGKYAKNLETLSVAF
AGSSDWGMECVLRGCPKLRKLEIRDCPFGNAALLSGLERYESMRSLWMSDCKLTMNGCRL
LAKEMPRLNVEVIKEEGCYEGPAQRVYVYRSVAGPRRDAPSFVLAHCGPHNARGSGKGST
TWSIVCTMQPYLVCYMRGYFQNL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcaggatcagaaagaaggaatctccagaaccaaacatcttgaaccaagcttca
ccttttcctgatgaggtgttggaacgagttcttggcatggtgaaatcacgcaaggatcgg
agctcagtttcactggtttgcaaagagtggtacaacgctgagagatggtcaaggaggagt
gtgttcatagggaactgttactctgtctctcctgagatcttgactcgcaggttcccaaac
attcgtagtgttacactgaaagggaagcctcgtttctcagatttcaacttggttcctgca
aattggggtgctgatattcgttcctggcttgtggtgtttgctgacaagtaccctttgctt
gaggagttgaggctcaagaggatgactgtttctgatgagagcttggagtttctggctctt
tcttttccctatttcaaagctctttccctcctgagttgtgatggattcagcactgatggg
ctggctgcaattgccactagttgcaagaatttaactgagcttgacatacaagagaatggt
attgatgacaaaagtggtaactggttgagttgcttcccagaaagctttacatcattggaa
gtattgaactttgccaaccttcccaatgatgtaaattctgatgcactagagaagcttgtc
agtagatgtaaatcattgaagactttgaaggttaatagaagtgtaacactagaacagtta
caaagactacttgttcgcgcccctcagttatgtgaacttggtagtggttcattttcagaa
gacgatctgacagctcagcagtattcagagattgagagtgcgttcaacaattgtaaaaac
ctccataccctttctggtttatgggatcctgcagaacaatatctccctcttctgtaccct
gcttgcacaaatcttactttcttcaatttaagttatgctcctcttgacggcgatgatctt
gctaagcttcttgttcactgtcctaatcttcggcgcctttgggttgtggacacagtggaa
gacaagggactggaagctgttggttcacactgtccactgcttgaggaactgcgtgttttt
ccagcagatccctttgaagatgaggccattggccatggggttactgaatcagggtttgtt
gctctctctcgtggatgcccgagacttcactacgtgctctacttttgccgtcagatgacc
aatgctgctgttgctaccgttgtgcaaaactgccccgactttactcatttccgactctgc
atcatgaaccctggtcagccagattacctgacacatgaacctatggatgaagcttttgga
gcagttgttaaaacttgcagtaaactccagaggctcgcagtgtcaggtttactgactgac
ctaacattcgagtatatagggaagtatgccaaaaatttggagactctttcagtggctttt
gctggaagcagtgattggggcatggagtgtgtgctgagaggctgtccaaagctaagaaaa
cttgagataagggactgcccattcggcaatgcagcacttctgtcgggtttggagaggtac
gagtcgatgaggtcgctgtggatgtctgactgcaagctgacaatgaatgggtgtagattg
ctggcgaaagagatgccgaggttgaacgttgaagtaataaaggaagaaggatgctatgag
ggtccggctcaaagagtttatgtttatcgttctgttgctggcccaaggagggacgcccct
tcatttgtcctcgcgcattgcgggccccacaatgcgcgaggttcaggaaagggttcaacc
acttggtctattgtatgcactatgcagccttatcttgtttgttacatgagaggctatttc
cagaacctgtga
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