Lotus japonicus: 130710293
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Entry
130710293 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130710293
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
lja03015
mRNA surveillance pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130710293
09122 Translation
03013 Nucleocytoplasmic transport
130710293
03015 mRNA surveillance pathway
130710293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130710293
03041 Spliceosome [BR:
lja03041
]
130710293
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130710293
Spliceosome [BR:
lja03041
]
Complex C
Other components
EJC/TREX
130710293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
Glyco_hydro_48
Motif
Other DBs
NCBI-GeneID:
130710293
NCBI-ProteinID:
XP_057415488
LinkDB
All DBs
Position
4:77864982..77868968
Genome browser
AA seq
700 aa
AA seq
DB search
MSSPYPILDDKPIDQWRVTELKEELKRRKLTTKGLKDDLIKRLDQALRLERDGADGSGSQ
KDEVNGLDGDIAELNDSHMKTAVGLEVVDTAGKGSAAVVEPMEKENAGMSPEVVHDDSKK
SDDVVPVDIDGGVLRAVDQAVRYTDFPAGVDSTNGREELTTHTSTTETTVTVTESVLTEE
VVSGQDSVSAEPQSIHDQDSVTMQENEESKAGMDEDSKPQLDCDLKPLCEDLTPNSSLPE
NQVSEVNPSLGSHLKSDSISSNSVSINQKNELKDTIIADNVKLEEDIVRPEMVEEPSSNN
DIPGHDVSHSMDVGEPHKKKTPVEENSYNNKSPNLNKPNSSEDVEYPEKLNLDRSSGDDS
MEEDLPESKQYDSKFNVDELRDKGESVEVSILKEEGRTAVVGDGLSPDRGDTHHDNEIPP
VSLVEKRKSHDQASAGNNEPAKRQRRWNSETVKGSDQQVPSLRPATTRKDEPIASKGKFS
RLDSSTIDDAPKERIVPPSQRAPTCSLRIDRFLRPFTLKAVQELLGKTGNVISFWMDQIK
THCYVTYSSVEEAIETRNAVYNLQWPRNGGHLLVAEYVDPQEVKMKLEPTPAVVIPVSND
LTAHPATPSSKPEPPPLQHSEEPSFPAMLLPPPPPLSKLPPAARERLPPPPPPEKVDRPI
VTLDDLFRKTSAAPRIYYLPLSEEQVAAKLAVQGKSIIKQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaccgtatccgattctcgacgataaacccatcgatcagtggagggttacggag
ctaaaagaggagttaaagagaaggaaactaaccaccaaaggtttaaaggatgatttgatc
aagcgtttggatcaagctcttcgccttgaaagggatggtgctgatggttctggttctcag
aaggatgaggttaatggtttggatggtgatatagctgagctgaacgattcacatatgaag
actgcagttggtcttgaagtagttgatacagctggaaagggaagtgcagctgtagttgaa
ccaatggaaaaagaaaatgcaggaatgagtcctgaggttgtgcatgatgacagcaaaaag
agtgacgatgtcgtcccggttgacattgacggtggtgtcttgcgggcggtggaccaagca
gtgcgatatacggactttccagctggtgtagattctacaaatgggagagaggagctaact
acccacacttctacgacagagaccaccgttacggtcactgaaagtgtcttaacagaagaa
gtagtcagtggtcaggattctgttagtgctgaaccacaaagcattcatgatcaggattct
gttacaatgcaggagaatgaggagtccaaggctgggatggatgaagactcaaagcctcag
ctggattgtgacctaaagcccttgtgcgaggatctcacacccaactcttctcttcctgaa
aatcaggtatctgaggtcaaccctagtttagggtctcacctaaaatctgattctatttct
agtaattctgtgtcaattaatcaaaagaatgaactaaaggatactataattgctgataat
gttaaattagaggaagatattgttaggccagagatggtggaagaaccatcatcaaataat
gatatcccaggtcatgatgtatcacattcgatggatgttggagagccacataagaaaaag
acacctgttgaggaaaatagctataataataaaagtccaaacctgaacaagcccaatagc
agtgaagatgttgagtatccagaaaagttaaacttggatagaagttctggtgatgattcc
atggaagaggatttgcctgagagcaagcaatatgattctaagtttaatgttgatgaactt
agagacaagggggagagtgttgaagtgtctatattgaaggaagaaggtcgtactgcagtt
gtcggagatggtctatctccagacagaggtgatactcaccatgataatgaaattcctcct
gtttcccttgttgagaaacgaaagtctcatgatcaagcttctgctgggaacaatgagcct
gcaaaacggcaacgaaggtggaactctgaaacagttaaaggttcagatcaacaagttccg
agcctcagacctgctactacaagaaaggatgagccaattgcttcaaaaggcaagttctct
aggttggattcctcaacaattgatgatgcacccaaagaacgcattgttccaccatcacaa
agggccccgacatgttccctcaggattgatcgtttcctccgtccatttaccttaaaagca
gtacaagagcttcttggtaaaactggaaatgtcatcagtttctggatggaccaaataaag
acccattgctatgtaacttactcatctgtcgaggaagccattgaaacacgaaatgctgtg
tataatctgcaatggcctcgaaatggcggacaccttttagttgctgagtatgtggatcct
caagaagtgaaaatgaagctagaacctactcctgctgtggttatccctgtcagcaacgat
ttaacagctcatcctgcaacaccttcctctaagccagagcctcccccccttcagcacagt
gaagagccttcgtttccagctatgctcctccctcctccaccaccgctttcaaagctacca
ccagcagcaagagaacgtcttcccccgcctccacccccagagaaagttgaccgacctatt
gtcacacttgatgatctctttcgtaaaaccagtgcagctcctcgaatttactatttacct
ttatctgaagagcaagttgcagcaaaacttgcagtacagggaaagagcatcattaagcag
tag
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