KEGG   Lotus japonicus: 130710375
Entry
130710375         CDS       T04348                                 
Name
(RefSeq) autophagy-related protein 18b isoform X1
  KO
K17908  autophagy-related protein 18
Organism
lja  Lotus japonicus
Pathway
lja04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:lja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    130710375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lja04131]
    130710375
   03029 Mitochondrial biogenesis [BR:lja03029]
    130710375
Membrane trafficking [BR:lja04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    130710375
Mitochondrial biogenesis [BR:lja03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    130710375
SSDB
Motif
Pfam: PROPPIN WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd BCAS3_WD40 WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 130710375
NCBI-ProteinID: XP_057415591
LinkDB
Position
4:66378434..66384072
AA seq 366 aa
MASSPILCASFNQDHSCFAVSTKDGFRIFDTNTGKLCYERAVGGFVIVEMLFSSSLLAIV
GAGDQPTLSPRRLCLFNTTTGAALRELNFLTSILAVRMNRKRLIVILQDKAYVYDLNSLT
ILDTIDTVPNNKGLCAFSPCLDACFLALPASTTKGSALLYNVMECNLHCEIEAHRSPLAA
MVLSSNGMYIATASEQGTIIRVHLVSDATKSYSFRRGTYPSTIFSLSFGPSKQLPDILAA
SSSSGSIHIFTLGLASHPSRIKRSSSFLGSIIPGAVNDVLDPAYHHVLHNAVPAGVKSYA
VIHKVENVTDASSSELLACRANMCVITYNGYFQEYNLSIDAQNELSWALGREFNLLTVTL
DEVANT
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggcttcctcgcccatcctctgcgcttctttcaaccaggatcacagttgttttgcagtt
agcaccaaggatggtttcagaatatttgataccaatacaggaaaactctgctatgaaaga
gctgttggagggtttgttattgttgagatgctgttcagctcaagtcttcttgctatagtt
ggggctggtgatcagccaactttgtcgcctcgccggctctgtttattcaataccaccact
ggagctgctcttagagaattgaactttctcacttcaatactcgctgttcgcatgaataga
aaaagactcattgttattttacaagacaaagcctatgtatatgatttaaatagtctcaca
atcttggacactattgacacggtgccgaataataaaggactttgtgctttttccccttgt
ttggatgcttgcttcctggctcttcctgctagcaccaccaaaggatctgcattattgtac
aatgtcatggaatgtaatttacattgtgagattgaggctcatcgttcaccactggctgca
atggtcctttcttctaatgggatgtacatagctacagcatctgagcaagggactataatt
agagttcatttggtgtcagatgcaactaagtcatatagctttcgaagaggaacatatcca
tctactatattttctctttcatttgggccatcaaagcagcttccggatattcttgctgcc
tcaagttcttctggttctattcatattttcactcttggacttgcttcacatccaagcagg
atcaagagatcaagtagttttcttggatcaataattcctggtgctgttaatgatgtactg
gatcctgcttatcatcacgtgcttcataatgctgttcctgcaggggtcaaaagctatgca
gtgattcacaaggtagaaaatgttactgacgcctcatcatctgaacttctagcttgtagg
gccaatatgtgtgtaataacttacaatggctacttccaggaatacaacttaagcattgat
gcccagaatgaattatcttgggctttagggcgtgagtttaatcttttgactgtgaccttg
gatgaagtggcaaacacgtag

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