Lotus japonicus: 130710382
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Entry
130710382 CDS
T04348
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25869
zinc finger protein IDD1/2
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
130710382
Transcription factors [BR:
lja03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130710382
BRITE hierarchy
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
YscJ_FliF_C
Motif
Other DBs
NCBI-GeneID:
130710382
NCBI-ProteinID:
XP_057415599
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Position
4:complement(16753570..16756456)
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AA seq
525 aa
AA seq
DB search
MPVDFDNVSTPSGEAPSVSSSGNQPPQPTTKKKRNLPGMPDPEAEVIALSPKTLMATNRF
VCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVRKRVYVCPEPTCVHHDPSRALGDL
TGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGTREYKCDCGTVFSRRDSFITH
RAFCDALAEESTRSQTQKANSESESKVLTADSSPPPAAATAAAANASTTQSNSGISSALQ
TQNLELPENPQQIREEPQAVVATAALNGSCSSSSCTTTITATTSSTSIANGSGATNNSCS
VFASLFASSTASGSLHSQAQPAFTDLIRAMGCPDRPADLSLPAPSSSEAISLCLSTNHGP
SIFGTGGQLEYRQYMPSPQPPAMSATALLQKAAQMDAAATNASLLRGLGIVSSSSAASTS
SGQQDSLQWGQVKVERDSDGFPSGLGLGLPSDGGSGLKELMMGTPTVFGDPKQTTLDFLG
LGMAVGGSSGGGISALMTSISGGFDVTTSFGNGGEFSGKDIGRSS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgattttgacaatgtttccacaccttcaggggaagcacctagtgtttcttcc
tctggtaatcaaccaccacaacccacaaccaagaaaaaacgaaaccttcctggaatgcca
gatccagaagcagaggtgattgctctgtcaccgaagactctaatggcgacgaacagattc
gtatgcgaaatttgcaacaaagggtttcagagggaccagaatctgcagcttcaccggaga
ggtcacaatctgccatggaagctgaggcagaggacgagcaaggaggtgaggaagagggtg
tatgtctgcccggaaccaacgtgtgtccaccatgacccttctcgagcgttgggtgatctc
accggaattaaaaagcacttctgcagaaagcacggtgagaagaagtggaaatgcgagaaa
tgctccaagaaatatgcagttcaatctgattggaaagctcactccaaggtttgcggtacc
agagagtataaatgtgactgcggcacggtgttttcgaggagggatagcttcattactcat
agagctttttgcgatgcgttggcagaggagagtacaagatctcagactcagaaggcgaat
tcggagtctgaatcgaaggttttaacggctgattcttcaccgccgccagctgctgccact
gccgccgccgctaatgcttctactactcagtcaaatagtggcatttcctctgctttgcag
acacagaacctagagttgcctgaaaatccccaacaaatcagagaggaaccacaagctgtt
gttgctactgctgctttaaatgggagctgcagcagcagcagctgcaccaccacaatcact
gccactaccagctccacctcaattgccaatggtagtggtgctactaataatagctgtagt
gtgtttgcaagcttgtttgcctcctcaaccgcatctgggagcctgcactctcaagcacag
ccagcattcacggacctaattagagccatgggatgtcccgaccgccctgcagacctctcc
ctcccggctccttcgtcatctgaggccatatctctctgcctctccaccaatcacggacca
tccattttcggaactggagggcagctggagtaccgccagtacatgccatcgccgcagccg
ccagccatgtccgccactgcattgctgcagaaggctgctcagatggatgctgccgccaca
aatgcctcattgcttcgcgggttgggcattgtgtcatcgtcttcagcggcttcaacttca
tccggccagcaagatagcctgcaatggggtcaggtgaaagtggagcgggatagtgatggg
tttccttccgggcttggacttgggcttcctagtgatggcggttcaggactgaaggaattg
atgatggggacacctacggtgttcggtgatcctaagcagaccacccttgatttcctagga
ttggggatggctgtgggtggcagttctggtggaggcatatctgcactcatgacatctatt
agtggcggtttcgatgttacgacatcatttggtaatggaggagagttctctggcaaggac
attgggaggagctcatga
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