Lotus japonicus: 130710842
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Entry
130710842 CDS
T04348
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130710842
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
130710842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
zf_PCFS4
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
130710842
NCBI-ProteinID:
XP_057416199
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Position
4:complement(69624607..69627040)
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AA seq
603 aa
AA seq
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MVFCSHCLKNVPGDRTPDKKLCCRLCGKVLEEFYYSDDPGFTKDSSGQSRISGQCVSSIQ
SEFSASRQRTLDNAHAYIKAMSCSLGVDDENMFNQALAFYRIGLERNFTKGRRSELVQAS
CLYIAFRQNNKPYLLIDFSNYLRTNVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFIFK
YTTSLLNHRNVCVTQTALNIIASMKRDWMTTGRKPGGLCGAALYVAALANGWKKSKSEIQ
RIVHVCEATLTKRLVEFENTESASLTVEELNTMAKELENNPAPVKIPNGEGEGSKDLLCE
HKASGKVPYFALGLCETCYKDFEKLSGGLSGGLDPPAFQRSAKLHSEESAKKSNEDLVKA
TNEASCESRLDKNLHASQPESINCEHDESHREDDMNAKTDDEESESLSDIDDLEVNGYLH
SEQEKHFKKIIWEKMNREYLEEQAVKEAAAAAAKKAFEANFENCSEDLLAAREFAESTAA
SVAKSRKEMKKRRAEEAKSLGPPQSAAEATKQMLRTKRLSNKVNYDLLQSLFDEPVAPEN
PKKVRFEIPSDDQDNLKSKFGDKIQDDELGSVDEFEDDDMHGDYYGNADEAYDYEDDGYS
FDY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttgtagtcactgtttgaaaaacgttcccggagatcgaacccccgataaaaaa
ctatgttgtagactatgtgggaaggtattggaggagttttattattctgatgatcctggc
tttacaaaggattcatctgggcagagcagaatatcaggccagtgtgtaagttcaatccaa
agtgaattctccgcctcgcggcaaaggactttagacaatgctcatgcatatatcaaagct
atgagttgcagccttggagtggatgatgaaaatatgttcaaccaagctttagctttctat
agaataggacttgagagaaatttcaccaagggacgtcgatcggaactagtacaggcatct
tgcttatatatcgcgttccggcaaaataataagccataccttcttattgatttttcgaat
tatttaaggactaatgtgtatgttctaggtgcagttttcttgcagctttgtaaattgttg
agtcttgaagagcaccccattgttcaaaagcctgtggatcctagtctttttatttttaaa
tatacgacgagtttgttgaaccataggaatgtttgtgtcactcaaactgcactcaatatt
attgctagcatgaaacgcgactggatgacgacggggaggaagccgggcgggttatgtggt
gcagcattgtacgtggctgctcttgctaatggttggaaaaaatctaagtcggagattcaa
agaattgtccatgtatgtgaagcgacgttgactaagcggttggtggaatttgaaaataca
gaatctgctagcttgacagttgaggagttgaatacgatggcgaaggagcttgaaaacaat
cctgctcctgttaaaataccaaatggtgaaggtgaaggttcaaaggatctactatgtgaa
cacaaggctagtggtaaagtgccctattttgctcttgggttatgtgaaacatgttacaag
gattttgagaaactctctggtggacttagtggtggtttggatcctcctgcattccagcgt
tctgcaaaattacattctgaagaaagcgccaagaaatccaatgaagatttggtgaaagca
acaaatgaagcatcatgtgagagtcgactagacaaaaatttgcatgcctctcagcctgaa
agtattaattgtgagcatgatgagtcacatagggaagatgatatgaatgcgaaaactgac
gatgaagaatcagaaagtctttcagatattgatgatctggaggttaatggctaccttcac
agtgagcaggaaaagcattttaagaaaattatttgggaaaagatgaacagagaatatcta
gaggaacaagcagtcaaggaagcagctgcagcagctgctaagaaagcttttgaggcgaat
ttcgaaaactgttctgaggatttgcttgcagcgagagagtttgctgaatctactgctgca
tctgtggcaaaatcgagaaaggaaatgaaaaagagacgagccgaagaggcaaaaagcttg
ggtcctcctcaatctgctgcagaggccactaagcaaatgttgagaacaaagaggctcagt
aacaaagtcaactatgatctcttgcaatcattatttgatgaacctgttgctccagagaat
cccaagaaagtacgatttgagataccctctgatgatcaagataatttgaagtccaagttt
ggggacaagatacaagatgatgaactgggatcagtggacgagtttgaggatgacgatatg
cacggagattattatggaaatgccgacgaggcatatgactatgaggatgatgggtacagc
tttgattattag
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