Lotus japonicus: 130710981
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Entry
130710981 CDS
T04348
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
lja
Lotus japonicus
Pathway
lja04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130710981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130710981
03029 Mitochondrial biogenesis [BR:
lja03029
]
130710981
Membrane trafficking [BR:
lja04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130710981
Atg1 complex
130710981
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130710981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
130710981
NCBI-ProteinID:
XP_057416380
LinkDB
All DBs
Position
4:78362184..78366608
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AA seq
543 aa
AA seq
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MVPQPHGSAHSDAAKTEQIITEFFAKSLHIILESRAVYASSRNSCADQAVLSSPCSSASS
SSSSVRPRDKWFNLALRECPSVLENVDLGRRNNLECVVIDVILVQRALDCDPVTSSFSPK
RVLPRSSLLKERYPLCCNAGREEFGIEAKSEKIVERWVIQYESRKTRDSNSGNRRSSNSS
LSSLYKKVTLLVRSLYATVRLLPAYKIFGELNSSAQIRDFTLAHRISSIVEPLTRKEEAE
MLKFGFTPVDTSSGRLCLSVMYCPSASDVSSEPSTPLFPQVIPDYVGSPLADPLRKFPSL
PVAGFPFPRQHCGNCDHCRASPPSITNSAEKSFSPGKVESRKYSGVKISANSSPQISTSR
SSSRSYPEDFDGSDFTWPFDLEDDDADPGSRAESLDHGHMAEVLKAGGFFPIRKSHDAAV
GALVHMLKKAPPLHQDFSTSEHSSLQEGLHQTATPNSRVSVTTTPVKLANQQPKKEHSSH
GSRETLNSNTLEPNQILEEPRPVSIKSTGITATRKTASDALEEFHGYKKMKNLLLKQGSM
PQL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggtacctcaacctcatgggagtgcacactctgatgcggcgaagacggaacagataatc
actgagttctttgcgaagagtcttcacataatacttgaatctagggcggtttacgcgtcg
tcgcgcaactcgtgtgctgatcaagcagtgttgtcgtctccgtgttcatcggcttcatcc
tcctcatcgagcgtgcggccgagggataaatggttcaatttggcgctccgggaatgccct
agtgtgttggagaatgttgacctcgggcgccggaataatcttgagtgtgtggtgattgat
gtgattttggtgcagagggctttggactgcgaccccgtgacctcgagcttttctccgaaa
agggttcttcctaggagttctttactcaaagaacggtatccgctttgctgtaatgctggt
cgagaagaatttgggattgaggcaaagagtgaaaagattgtagagagatgggtgatacaa
tatgagagtaggaagacaagggattctaattctggaaataggaggtcaagcaatagttct
ttgtctagcctgtataagaaagtaactttactcgtgagatctttgtatgccactgttaga
cttttacctgcctataaaatttttggagagcttaattcatctgcacagattcgtgacttt
accctcgctcaccgcatatcctcaatcgttgagcccttaacccgtaaagaagaggcggaa
atgctgaaatttgggttcactcctgttgatacttcttctggtaggctttgcctttctgtg
atgtattgcccgtcagcctcagatgtgagctctgaaccatcaactcctttgttcccacaa
gttatacctgactatgttgggagtccattggcagatcctttgaggaagtttccatcactt
cccgtggcagggttcccatttccaaggcaacattgtgggaattgtgaccattgtagagcc
tcacctccatccattactaattcagctgagaagtcgttttctcctggaaaagtagagtct
cgaaaatattctggagttaagatatcagctaatagctcaccacagatttcaacttccaga
agctccagtaggtcttatccggaggattttgatggttctgattttacttggccatttgat
ttggaggatgacgatgcagatccaggaagcagagcggaatccttagatcatggtcacatg
gctgaggtgcttaaagctggaggattctttcctatcagaaagtcacatgatgctgctgtc
ggtgcgcttgtacatatgctgaagaaagcaccacctctccatcaagatttctccacttca
gaacattcttcacttcaggaagggcttcaccaaactgctactcctaattcaagagttagc
gtcacaactacgccagtgaagttagccaatcaacaaccaaaaaaagaacactcgtcacac
ggcagccgcgaaaccttaaacagcaatactctagagcccaatcaaatcctagaggaacca
agaccagtgagtataaagtctactgggataacagcaactaggaaaacagcaagtgatgca
ttggaagagttccatggttacaaaaaaatgaaaaacttgttactcaagcaaggtagtatg
cctcaactatag
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integrated database retrieval system
