Lotus japonicus: 130711012
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Entry
130711012 CDS
T04348
Name
(RefSeq) novel plant SNARE 12
KO
K08494
novel plant SNARE
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130711012
Membrane trafficking [BR:
lja04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
130711012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
PigL_N
GCIP_C
VBS_C3G9
IL11
WXG100_2
FAM13A
DUF6988
ThrE
GxGYxYP_C
Motif
Other DBs
NCBI-GeneID:
130711012
NCBI-ProteinID:
XP_057416425
UniProt:
I3SMK2
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All DBs
Position
4:complement(69031264..69036888)
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AA seq
269 aa
AA seq
DB search
MATNLQMTPQLEQIHGEIRDHFRALANGFQKLDKIKDSNRQSTQLEELTGKMRECKRLIK
EFDREIKDEEGRNPPEVSKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDTGAGA
SEPTAEENVQLASEMSNQELVNAGMKTMDETDQAIERSKQVVHQTVEVGTQTAGTLKGQT
EQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVVAIIVVKIVNPN
NKDIKDIPGLAPPAPTRRLLYVRTGEQFD
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacttgcagatgacccctcagctcgaacagatccacggtgaaattcgcgac
cactttcgagccctcgcaaatggctttcagaagctggataagattaaagattccaacaga
caaagtactcagctggaagaactaacagggaagatgagggagtgcaaaaggttgataaaa
gagtttgatcgtgaaattaaagatgaagagggaagaaatcccccagaagtgagcaagcaa
ctcaatgacgaaaagcaatcaatgatcaaggagctaaattcatacgtcgcattaagaaaa
acgtacatgaataccattggtaataaaaaacttgaactgtttgacaccggagcaggagca
agtgaacctacagctgaagaaaatgtccaactggcatcagaaatgtcaaatcaagaactt
gtcaatgctgggatgaaaacaatggatgaaactgatcaggctattgagagatctaagcag
gttgtacatcaaacagttgaagtgggcacccaaactgctggtaccttgaaaggccaaact
gaacaaatgggccgtattgttaacgagcttgattcgatccagttctcaattaagaaggcc
tcccaactcgttaaggagattggtagacaggtagctacggacaagtgtatcatgcttttt
ctgttccttatcgtctgtggtgtagttgccattattgtcgtgaagattgtgaatcccaac
aacaaagatatcaaggatattccagggttggcgcctccagctcccactaggaggcttttg
tatgtaaggactggagaacaatttgattaa
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