Lotus japonicus: 130711054
Help
Entry
130711054 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130711054 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130711054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130711054
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130711054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
DM13
Motif
Other DBs
NCBI-GeneID:
130711054
NCBI-ProteinID:
XP_057416476
LinkDB
All DBs
Position
4:76120012..76127263
Genome browser
AA seq
788 aa
AA seq
DB search
MPRKVNYGLDYYEDDDYADYDYDLDIQEQHVTGEGPDTKQETVRPGLWPCPICTYDNDDS
MTTCDICGVVRHSFVNMATSNTIKPVEDISKTPGASKLARSLFQPLPKQIPKELELFPKQ
DDGFQTGGSDFYKLENVQGEFHEIHKAFNTQSHPYLNIDSFKFDGPSPDDVVYSGLSSSK
KGLKDKVANSKTNQLSSSNREKNELFAQPNAESLDNLSSLMQKSRQGSSADNKLAKNAEI
DLVTGKTSNSLQASLAKDKGDNMNKINSSKRGTIDIQSSKETLGSLSALPKVKESDKINF
SSTRDGKPESVSSSFNNMVLDVKSGNSDSTNSRGSRPQVPYKPENWMLPQQSSKDALSQL
NLAIVGHVDSGKSTLSGRLLHLLGRISPKEMHKYEKEAKLQGKGSFAYAWALDESSEERE
RGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGAFEAGMD
GSKGQTREHAQLIRSFGVDQVIVAVNKMDAVGYSENRFDFIRQQLGSFLRTCGFKESSLS
WIPMSVMENQNLVASPKDTDFKNWYSGPYLLEAIDSLQPPIREFSKPLLMPICDVIKSTT
LGQISACGKLEAGALRSGSKVLVMPSAVAGTVRSLERDSNVCNIARAGDNVAVTLHGIDG
SHVMAGDVLCHPDYPVAVAKHLELKVLVLDGANPILVGAQSEFHIHHAKQPARVSRILSV
LDPKTGKVTKKSPRCLTAKQSAVIEVTLQEPVCVVEFSTCKALGRVSLRSLGRTIAVGLV
TRIIEEQE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtaaactacggactcgattactacgaagacgacgactatgccgactac
gactacgatcttgacatacaagaacaacatgtaacaggagaaggacctgatacaaagcaa
gagaccgtgagacctggactttggccatgccccatttgcacttatgacaacgatgacagt
atgactacctgcgatatttgtggtgttgtacgtcattcctttgttaacatggcaacttct
aacactatcaaaccagttgaagacataagcaaaactcctggagcatccaagttggccagg
tctctttttcaaccattaccaaaacagattcccaaagagcttgaattatttcctaagcag
gatgatggttttcagacaggtggcagtgacttctacaagcttgagaatgtccaaggagaa
tttcatgaaattcataaggcttttaacactcaaagccatccctatttaaacatagattct
ttcaagtttgatggtccatccccagatgatgtggtttattctggcctaagttcttcaaaa
aagggtctgaaagataaagttgcaaactcaaaaactaatcagctttcgtcaagcaacaga
gagaaaaatgaactttttgcacaaccaaatgctgaaagtttagacaacttatcatcccta
atgcaaaagagcaggcagggaagttcagctgataacaagctggccaaaaatgcagaaatt
gatttggtaactggtaaaacttcaaacagcttacaagcatctttggcaaaagacaaaggt
gacaatatgaataaaataaattcttcgaaaaggggtacgattgatattcaatcaagcaaa
gaaacattaggtagtttgtctgcactgccaaaagtcaaagaaagtgataagattaatttc
tcttctaccagagatggaaaacctgaaagtgtttccagcagttttaacaacatggttctt
gatgtaaaatctggaaattctgatagtactaattctaggggatctcgtccacaagtccct
tataagccggaaaactggatgctccctcagcaatcttctaaagatgcattgtctcagctg
aatcttgcaattgttggtcacgttgattctggaaaatctacactatctggtaggttatta
catctattgggacgaatttccccaaaagaaatgcacaaatatgaaaaggaggccaagtta
cagggcaagggatcctttgcttatgcttgggcacttgatgaaagttctgaagaaagggaa
aggggaataacgatgacagtggctgttgcttattttgacaccaagaaatatcacgttgtt
gtgctcgactcccctggccataaagattttgtccctaacatgatttctggggcaacacaa
gctgatgctgcaattcttgttatagatgcctcacttggtgcatttgaagcaggtatggat
ggtagcaaaggacaaacaagggagcatgcacaacttattagaagttttggtgttgaccag
gttatagttgctgtaaataagatggatgctgtgggatactccgaaaatcgatttgatttt
attcggcagcagctcggaagttttctccgcacatgtggattcaaagagtcttctctatca
tggattcccatgagtgtgatggaaaatcaaaatttggtagcatcccctaaggacactgat
tttaaaaactggtatagtggaccttatctattagaggcaattgactcgctccaacctcct
attagagaattctcaaaacctctactaatgccaatatgtgatgttatcaaatcaactaca
ctgggacagatttctgcttgtggtaaactggaagcaggagcccttcggagtggatcaaag
gtcttagttatgccttcagctgttgcgggaacagtacgctcattggagcgtgactctaat
gtctgcaatattgctagagctggagataacgtagccgtaacgttgcacggtattgatgga
agtcatgtgatggcaggagatgtactatgccatcctgactaccctgttgcagttgctaag
catttggagttgaaagtgcttgtcttggatggtgcaaatcccatattggtgggagctcag
tcagagtttcatatacaccatgcaaagcaacctgctagagtttcgagaatattgtcggta
cttgatcccaagactggtaaggtgaccaaaaagtcccctcgctgtctcactgcaaagcaa
agtgcagtcattgaggtgactttgcaggaaccggtatgtgttgtagagttctctacttgt
aaagctcttggaagggtgtccctcagatcattaggaagaacaattgctgtcggacttgta
acaagaataattgaagaacaagaataa
DBGET
integrated database retrieval system
