Lotus japonicus: 130711182
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Entry
130711182 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130711182 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130711182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130711182
03012 Translation factors [BR:
lja03012
]
130711182
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130711182
Translation factors [BR:
lja03012
]
Eukaryotic type
Release factors
130711182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
130711182
NCBI-ProteinID:
XP_057416669
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Position
4:complement(83246641..83255780)
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AA seq
517 aa
AA seq
DB search
MDLEEDIRSLQLDSAAEDNNGVVNREDGKEEVEKSDKMDEDPNQEVMAQAAEAQEVQAQA
IEAEPTAWLSSVVNEEISVAPDEEEEPAMKKRHLNVVFIGHVDAGKSTTGGQILFLSGQV
DERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETSRFTILDAPG
HKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVQLAKTLGVAKLLVVVNK
MDDPTVNWSKERYDEIESKMIPFLKQSGYNVKKDVLFLPISGLMGSNLKTRLDKSTCPWF
NGPCLFEALDSIEGPPRDPKGPFRMPIIDKFKDMGTVVMGKVESGSIREGDSLLVMPNKV
QVKVVAVFIDEERVKRAEPGENLRVRVSGIEEEDILSGFVLSSVAKPIPSVTEFVAQLVI
LELLDNAIFTAGYKAVLHIHSVVEECEIVELLHQIDPKTKKSMKKKVLFVKNGAVVLCRV
QVNSMICIEKFSDFPQLGRFTLRTEGKTVAVGKVTAL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggaggacattcgttctttacagctcgattcagcagcagaagacaataat
ggggtggtaaatcgagaggatggaaaggaagaagtagagaaatctgacaagatggatgaa
gatccaaatcaggaggttatggcacaggctgctgaggctcaggaggttcaggcacaggct
attgaggctgagccaacagcatggctttcttctgtagtgaatgaggaaatctccgtggcc
ccagatgaagaagaggagcctgcaatgaagaaaagacacttgaatgtcgtattcataggc
catgtcgatgctggtaagtctacaacaggaggccagatacttttcctcagtggtcaggtt
gatgaacggactatccaaaaatatgagaaagaagctaaggacaaaagtcgtgaaagctgg
tatatggcctatattatggatacaaatgaggaggagagggtcaagggaaagacagttgaa
gttggaagagctcattttgagacagagacatctaggttcaccattttggatgcacctggt
cacaaaagctatgttcctaatatgatcagtggtgcatctcaagctgatattggagtgttg
gtaatttctgctcggaagggagaatttgaaactggatatgagaaaggtggtcagactcgt
gagcatgtccagcttgcaaaaactcttggagtggctaagctgcttgttgttgtcaacaaa
atggatgatcctactgtaaactggtcaaaagaaaggtatgatgaaattgagtcaaagatg
attccatttcttaagcaatcgggatacaatgtaaagaaagatgtcttgtttttaccaata
tcggggctgatgggctcaaacttaaaaacaagattggataaaagcacttgtccatggttt
aatgggccttgcttatttgaagcccttgattctattgaaggacctcctcgagatcccaaa
ggtccttttaggatgcctataattgacaaattcaaagacatgggaactgttgttatgggt
aaagtggaatctggttctattcgtgagggagattccttgttggtcatgccaaataaggtt
caagttaaagttgttgctgtatttattgatgaagaacgggttaagcgtgctgaacctggt
gaaaacttgcgggttagagtatctggtattgaagaagaagacatattatctgggtttgtt
ttgtctagtgttgcaaaaccaattccatcagttactgagtttgttgctcagttggttatc
cttgaattgctggacaatgccatctttactgctgggtacaaggctgttctgcatatccac
tctgtagttgaggaatgtgaaatcgtggagctcttgcatcaaattgatccgaagacaaaa
aagtctatgaaaaaaaaagtcctctttgtgaagaatggcgctgttgtattatgccgtgtt
caggttaatagcatgatatgcattgagaagttctctgactttccgcaactagggaggttt
actcttcgcactgaaggaaaaactgttgctgttgggaaagtcactgctctgtga
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