Lotus japonicus: 130711298
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Entry
130711298 CDS
T04348
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR17-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
lja
Lotus japonicus
Pathway
lja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130711298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130711298
03036 Chromosome and associated proteins [BR:
lja03036
]
130711298
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
130711298
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
130711298
RSF complex
130711298
WICH complex
130711298
B-WICH complex
130711298
NORC complex
130711298
BRF complex
130711298
NuRF complex (fruit fly)
130711298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
DBINO
Myb_DNA-binding
HDA2-3
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
130711298
NCBI-ProteinID:
XP_057416837
LinkDB
All DBs
Position
4:complement(72528966..72536616)
Genome browser
AA seq
1057 aa
AA seq
DB search
MARRNGSDSEEEEEEQQEEEVHDQIEEDDEELEAVARSASSDDEPDESGGEDAVAADDDN
QDDEGNAADPEISKREKARLKELQQLKKQKIQEILDAQNAAIDADMNNRGKGRLNYLLQQ
TELFAHFAKADQSSSQKKGKGRGRHASKVTEEEEDEEYLKEEEGGSANTRLMTQPSCIQG
KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEFKGITGPHMVVAPK
STLGNWMNEIRRFCPVIRAIKFLGNPDERRHIREELLVAGKFDVCVTSFEMVIKEKSAFR
RFNWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWALLNFLLPEI
FSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQ
MQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLVT
NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYKYCRIDGNTGGEDRDA
SIEAFNKPGSEKFVFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKK
EVQVFRFCSEFTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVF
SSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDPAELYNFDDKEDENKF
DIKKIVTENWVEPSRRERKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTH
RLNELYEKEVRRLMQAHQKSQVKDSIDVDEPEEIGDSLTVEEVEEKERLLEEGFSSWSRK
DFNAFIRACEKYGRNDIQSIASEIEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGE
TRISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWD
ELKSAFRMSPLFKFDWFVKSRTTQELTRRCDTLIRLIEKENQEYDERERQARKEKKLAAK
NSTPSKRAVPRQAESPSLKKRKQLTMDDYLSSGKKKK
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgaaacggctcagattccgaagaggaagaggaggagcagcaagaagaggag
gttcacgaccagatcgaagaggacgacgaggaactcgaagccgtggctcgctccgctagc
tccgacgacgagccggatgaatccggcggcgaagatgctgttgctgctgatgacgataat
caggatgatgaaggtaatgctgctgatcctgaaattagcaaacgcgagaaggctaggcta
aaggaattgcagcaattgaagaagcagaagattcaggagatactggatgcacaaaatgca
gccattgatgctgatatgaacaatagaggaaagggtaggttgaactatctcttgcagcag
actgagttgtttgctcattttgccaaagctgatcaatcttcatctcaaaagaagggaaag
ggaaggggacgccatgcatcaaaagtgactgaagaagaggaagatgaagagtacctgaag
gaagaagaaggtggttcagcaaacacacggctgatgactcaaccttcatgtatccaaggg
aagatgagggattaccaacttgctgggctaaactggctcatcagattgtatgagaatgga
ataaatgggattctggcagatgaaatggggcttggtaaaactttgcaaactatatctttg
ctggcctatttacatgagttcaaaggaataacaggccctcatatggtggttgctccaaaa
tctactcttggaaattggatgaatgagattcggcgcttctgtcctgttatacgtgcaata
aagttccttggtaaccctgatgagaggaggcatataagggaggagctattggttgctgga
aagtttgatgtgtgcgtgacaagctttgaaatggtaatcaaggagaagtctgcgtttcgt
cgatttaactggcgttacataattattgatgaagctcacagaatcaagaatgagaattcc
ctcctgtccaaaacaatgaggctatacaatacaaactatcggctccttataacaggcaca
ccactacagaacaatcttcatgaactctgggctcttctcaactttcttctgcctgaaatt
tttagttctgctgaaacttttgatgaatggtttcaaatctctggtgaaaatgaccaacag
gaagttgtccaacaactacacaaagtcctccgtccatttctccttcgaagattgaaatct
gatgtcgagaaagggttgccaccgaaaaaggaaaccattcttaaagtaggtatgtcacaa
atgcagaaacagtattatagggccttgctgcagaaggatcttgaggttgtaaatgccggt
ggagaacggaagcgtctcttaaatatagcgatgcaactacgtaaatgttgtaatcaccca
tatctcttccaaggtgctgaacctggtcctccctacacaacaggagaccatctggttaca
aatgctggtaaaatggttctactggataaattacttcctaaactaaaagaacgggattct
agggtacttatattttcacagatgactaggctgttggacatacttgaagattatttaatg
tttcgaggatacaaatattgccgcatagatggcaatactggtggagaagatcgtgatgct
tccattgaggctttcaacaaaccaggaagcgagaaatttgtcttcttgctatctactcgg
gctggtggtcttggcataaatcttgctactgctgatattgtcattctttatgatagtgac
tggaacccacaggttgacctgcaagctcaggatcgggctcataggattggtcagaagaaa
gaagttcaagttttcagattctgctcagagtttactattgaggaaaaagtcattgaaagg
gcttacaaaaagctcgcacttgatgctctggtgattcagcaagggcgtttagctgagcag
aagactgtaaataaggatgagttgcttcaaatggttagatttggtgctgaaatggttttt
agttccaaggacagtacaatcactgatgaggacattgacagaattattgctaaaggagag
gaagcaacagctgagcttgatgctaagatgaagaaatttactgaagatgctatcaaattc
aagatggatgaccctgctgaattgtataattttgatgataaggaggatgagaacaaattt
gatataaaaaagattgtgactgaaaactgggtcgaaccatcaagaagagaacggaagcgc
aattactcagaatctgaatacttcaagcaaactatgcgtcaaggtggtcctactaaacca
aaagagcctcgtattccaaggatgcctcaattgcatgatttccagtttttcaacacacac
aggctgaatgagctgtatgaaaaggaagttcgccgtctaatgcaagcacatcagaagagt
caggtgaaggactccatagatgttgatgaaccagaagaaattggagattcactgactgtt
gaagaggtggaagaaaaggagcgcctgctagaggagggattttcatcatggagccggaag
gattttaatgctttcattagggcatgtgaaaagtatggccgaaatgacatacaaagtatt
gcttctgagattgaaggaaaaacagaagaggaagttgaaagatatgcgaaagtcttcaaa
gaaagatacaaggaattaaatgattatgatagaattattaaaaacattgaaagaggggag
acaagaatatctcggaaagatgagatcatgaaagctattgggaaaaagttggaccgctac
aagaatccatggctagagttgaagatacaatatggacaaaacaaagggaagttatacaat
gaagaatgtgaccgattcatgatatgcatggttcacaaacttggctatgggaattgggat
gaattgaaatcggcgtttcgaatgtcgcccttgtttaagtttgattggtttgtgaagtct
cgcacgacgcaggaactgacaaggaggtgcgacaccctcattcggctgatagagaaggaa
aaccaagaatatgatgagagggagagacaagctcgcaaagaaaagaaactcgccgcgaag
aattcaaccccatcaaagcgtgcagtgccaagacaggcggagagtccatctctgaagaaa
cggaagcagttaactatggatgactatttaagctcgggaaagaagaaaaaatag
DBGET
integrated database retrieval system
