Lotus japonicus: 130711451
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Entry
130711451 CDS
T04348
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lja04990
]
130711451
Domain-containing proteins not elsewhere classified [BR:
lja04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
130711451
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
PD40
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
130711451
NCBI-ProteinID:
XP_057417055
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Position
4:complement(83278980..83283707)
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AA seq
610 aa
AA seq
DB search
MSHELVETYSCMPSTERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYP
ATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACG
DAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFR
FKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAV
SWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAV
SLGGTISIFLSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKWIQGIGYS
GKLHRKENCQIKCLAAVEDEIITSGFDNKIWRVSLHGDQCGDAEAIDIGNQPKDFSVALL
SPELALVSIDSGVVVLRGTKIVSTINLGFTVSATAVSPDGSEAIIGGQDGKLHIYSISGD
TFEEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVVWDRASRDVKLKNMLYHSARINC
LAWSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVFSDEFSLVSSGEDA
FIRVWKITAP
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgagctggtcgagacttactcctgcatgccatccacggagcgcggccgcggg
attctcatctccggcgacccaaagtccaactccatgctctacaccaacggcagatcggtc
gtcatcatcaaccttcaaaaccccctccaagtctccgtctatggggaacacgcctaccct
gccaccgtcgctcgattctcccccaacggcgagtgggtcgcctccgctgactcctccggc
accgtcaggatctggggcacccgcaacgacttcgttttgaagaaggagttccgtgtcctc
tccggtcggatcgatgaccttcaatggtcccccgatggtctcaggatcgtggcctgcggc
gatgctaaagggaaatctttcgtccgcgctttcatgtgggattcagggaccaacgttggt
gaatttgatggtcattccaggcgagttttaagttgtgcatataaaccgacaagacctttc
cgcattgtcacttgtggagaggattttctggtgaacttttatgaaggaccgccatttaga
tttaagcaatctcacagggatcattcaaattttgtcaattgtgtaagatattctccagac
ggcagtaaatttttaagtgtgggttctgacaaaaggggtatcatatttgacgggaagagt
ggagagaagattggtgagttgtcttctgaaggggggcatactggcagcatttatgctgtt
agctggagtcctgatggaaaacaagtgctgactgtatctgctgataagtctgcaaaagta
tgggacatatctgaggacaacaatggaaaagtgaagaaaacattgacttgtcccggctct
ggtggagttgaagatatgctagtagggtgcctgtggttgaatgaatatattgtcgctgtt
tctcttggtgggacaatatctatatttttatcaagtgatcttgataaagccccaacatca
ttttctggacacatgaaaaatgtttcctccttaactattcttaaaagtaaccctagaata
ctcttgtccagcagttatgatggcttaatagttaagtggattcaagggattggttacagt
ggtaaattacataggaaggagaactgtcaaattaaatgcttggcggctgtagaagatgaa
attattacatctggatttgataacaagatatggcgagtttctttgcatggggatcagtgt
ggagatgctgaagccattgatatcggaaatcaaccaaaggattttagtgttgcacttctt
tctcctgaacttgctctggtttctattgactccggagttgtcgtgctgcgtggtaccaaa
attgtgtcaaccattaacctcggatttactgtctcagcaactgctgtctctcctgatgga
agtgaagccattattggcggacaggatggtaaattgcatatatattctatttctggcgat
acatttgaagaagaggctgtcctagagaaacataggggagctattagtgtaattcggtat
tctccagacttttcaatgtttgcatcaggggatgtcaatcgagaagctgtagtgtgggac
cgtgcctcccgagatgtgaagcttaagaatatgttgtaccattctgctcggataaattgc
ctggcttggtcccctgatagccgtaggattgctacaggatcccttgacacatgtgtcatc
atatatgaaattgaccaacctgcatctagtagagttaccataaagggtgctcacttaggc
ggggtttatggcttggtattctctgacgagttcagtttggttagctcgggtgaggatgct
tttatccgtgtctggaagataaccgctccatga
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