Lotus japonicus: 130711515
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Entry
130711515 CDS
T04348
Name
(RefSeq) single-stranded DNA-binding protein WHY1, chloroplastic
KO
K26559
single-stranded DNA-binding protein WHY1
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130711515
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130711515
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Whirly
NT-C2
Motif
Other DBs
NCBI-GeneID:
130711515
NCBI-ProteinID:
XP_057417164
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Position
4:42542882..42553477
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AA seq
261 aa
AA seq
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MLHLQLQLHSPPPLLLSSSSSLKLPPNPHSLSLKRFPSKPLTLIRCRHSDLFDQKTFSSS
TPQPANPAAVSVGALPPRVYVGHSIYKGKAALTVTPRPPEFAPLDSGAFKISREGYVLLQ
FAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESCEFFHDPLKGKSDEGKVRKVLKLE
PLPDGSGHFFNLSVQNKIVNIDENIYIPVTKAELAVLSSIFNFIMPYLLGWHTFANSVNP
EYSSGVNNANPRYGGDYEWNR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatttgcagttgcagctacactcaccaccaccactactcttatcatcttcttct
tcccttaagcttcccccaaacccacactctttatccctaaaacgttttccttctaaaccc
ctcactctcatcagatgccgccactcagacctgttcgaccaaaaaaccttctcctcctcc
actccacaacctgcaaaccccgctgctgtttcagttggagctttgccacctagggtttat
gttggtcactccatttacaaagggaaggctgctctcacagtcactcctagacctccagaa
ttcgcaccactcgattcaggggcattcaaaatatctagggagggttatgtgttgcttcag
tttgcgcctgccattgcttcgcgccaatatgattggaatcgaaagcaggtgttctcgtta
tctgttgttgaaatgggaagtgtgattagtctaggtacaagggagtcttgtgaatttttt
catgatcctttgaagggaaaaagtgatgaaggtaaagtcaggaaagtcttgaagttggaa
cctcttccagatggttctggtcacttctttaacctcagtgttcaaaacaagattgtgaac
attgatgaaaacatctatatccctgttacaaaagcagagttagcagttttgagctcaatt
ttcaattttatcatgccataccttctagggtggcatacctttgcaaactccgtaaacccg
gagtattccagtggagtgaataatgccaacccaaggtatggaggagactatgaatggaac
agatag
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