Lotus japonicus: 130711532
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Entry
130711532 CDS
T04348
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130711532
Enzymes [BR:
lja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130711532
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130711532
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
130711532
NCBI-ProteinID:
XP_057417184
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Position
4:18676318..18685089
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AA seq
615 aa
AA seq
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MKIVTYNVNGLRQRIAQFGSLRNLLNSFDADIICFQETKLRRQDLTADLVMADGYESFFS
CTRTSDKGRTGYSGVITFCRVKSAFSSNEVALPLAAEEGFTGLMGDSQTCKANLPFSMDD
LEEFSKDELLSVDSEGRCIITDHSHFVLFNIYGPRAGGDDKERIQFKQNFYKILQKRWET
LLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEFRRWFKSMLIENEGRFSDVFRAKHPN
KTEAYTCWAQNTGAEVFNFGSRIDHILCAGSCLHESDDLKCHSFIRCHVMDCDILTEYKR
CKPESTLSAHRWKGGRSIKLEGSDHAPVYMTLLEIPEVSLHSTPFLSARYVPMVHGIQQT
LVSMLVKRRVSEQTKSCEMVNEDISMGSTYESIEPTNQTDSSTSECHFPSSQDSVCSILE
SKELSRGSSQEAAISKSGSGYEKSMPRKCNESKKKARNNQGSQLSLRSFFQKSTNLDNGV
NNSCTDHSNNQAEPSQPDPHLRETSTAIDHSSSPKQCEVNTDACDLDLAELNDSSRKEEK
SNVASLEWQRIQQMMQNSIPLCKGHKERCIARVVKKQGSNFGRRFYVCARAEGPASNPEA
NCGYFKWATSKSRNK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagttacatacaacgtgaacggcctgagacagcgcatagcgcagttcggttct
ctccggaatcttctaaattcattcgacgccgacatcatttgctttcaggagaccaaactc
aggaggcaggacctcactgcggatctcgttatggccgatggctatgaatctttcttctcc
tgcacccgcacctccgacaagggccgcaccggttattccggtgttattacattttgtcgt
gtgaagtctgcattttcgagtaatgaagtggccttgccccttgcggctgaggaaggtttc
actggtcttatgggcgactctcaaacttgcaaagccaatttgccattctccatggacgat
cttgaggaattttcaaaagatgagcttctcagtgttgatagtgaggggcgttgcattatc
acagatcacagtcactttgttcttttcaatatatacgggcctcgggctggaggtgatgac
aaagaaaggattcagttcaagcaaaatttttacaagatcttgcagaaaagatgggagact
ctcctgcatcagggaagaagaatatttgttgttggggatctcaacattgcaccatttgca
attgatcgatgtgatgcaggacctgattttgaaaataatgagtttagaagatggttcaaa
tcaatgttgattgaaaatgaaggccgattttctgatgtcttcagagcaaagcatcctaat
aaaacggaagcatacacctgttgggcacaaaatacaggtgctgaggtatttaactttggg
agtagaattgaccatattctatgcgcgggttcttgcttgcatgaatctgatgacctgaaa
tgtcatagttttataagatgccatgtaatggactgtgacattttgacagagtacaaacgt
tgtaaacctgaaagcacactgagtgcccacaggtggaagggggggcgaagcattaaactg
gaaggatctgatcatgctccagtttatatgactttacttgaaattcctgaggtctctctg
catagtactcccttcttatctgctagatatgttcccatggttcatggcatacagcaaact
ctagtgtcaatgttggtgaaaagacgagtttctgaacaaacaaaatcatgcgagatggta
aatgaagacatttcaatgggtagtacttatgagagtatagaaccaactaaccaaactgat
tcatctactagtgagtgtcattttccttcaagccaggattctgtgtgtagcattttggaa
tcaaaggaactttccagaggttcttctcaggaggcggctatttctaaatcaggaagtgga
tatgaaaaatcaatgcccaggaaatgtaatgaatccaagaaaaaagcaagaaacaatcaa
gggtcccagctctcccttcggtcatttttccagaaaagtacaaatcttgataatggtgtc
aataactcttgcactgatcactcaaataatcaggctgaaccctcacaacccgatcctcat
ttacgtgaaacttctacagcgattgatcatagtagcagtcccaagcaatgtgaggttaat
actgatgcatgtgacctggatttagctgaactaaatgatagttctaggaaggaagaaaag
agtaatgtagcttcactggagtggcaaagaatacaacaaatgatgcagaatagtatacct
ctttgcaagggccataaggaacgttgcattgctcgggtagtgaagaaacaaggatctaat
tttggccgcagattctatgtttgtgcccgtgctgagggccctgcatctaatcctgaagca
aactgtggttacttcaaatgggctacttcaaagtctaggaataaataa
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